Hello,
I got it. Thank you. I pushed changes made to atSNP Bioconductor.
I am fixing the graphic error in creating vignettes with plotMotifMatch
function. This graphic function uses plotMotifLogo function from motifStack
package. The issue seemed to be linked to that plotMotifLogo produces an
Sorry, please ignore my previous email. I remember my passphrase and pushed
the updates successfully.
On Tue, Feb 18, 2020 at 12:02 PM Xu Ren wrote:
> Hi,
>
> I'm the package maintainer of Bioconductor package methylGSA
> https://bioconductor.org/packages/devel/bioc/html/methylGSA.html. I have
Reminder: Two weeks left to submit proposals for Bioc2020
workshops/talks/posters as well as travel scholarships! See the Bioc2020
website for more details.
http://bioc2020.bioconductor.org/
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of
Thank you for the instructions, will do so soon.
Best Wishes,
Krutik
From: Shepherd, Lori
Sent: 18 February 2020 14:28
To: Krutik Patel (PGR) ; bioc-devel@r-project.org
Subject: Re: Changing the name of your package while it has been submitted
Excellent - much
Take a look at BiocSklearn.
Nitesh
> On Feb 18, 2020, at 8:11 AM, Zhang, David wrote:
>
> Dear all,
>
> I’m a bioinformatics PhD student at UCL who’s recently been trying to develop
> an R package that has some python dependencies. Specifically, areas of my
> current pipeline are written
Dear all,
I’m a bioinformatics PhD student at UCL who’s recently been trying to develop
an R package that has some python dependencies. Specifically, areas of my
current pipeline are written in python for speed and any ML has been
implemented through sklearn. I was wondering what you would
Hi,
The error you are showing in your feed is currently saying, you are NOT in a
repository which is hosted by github.
Also, your remotes should be the set to look like Step #2
(http://bioconductor.org/developers/how-to/git/push-to-github-bioc/). If that
is set up, your GitHub name should
Excellent - much easier process than trying to change the name of a package
already in Bioconductor -
Change the name of the issue
Change the link for the repository in the first comment
https://github.com/Bioconductor/Contributions/issues/1337#issue-549669447
Change the name in the
Hi Lori,
The name of my package is smiRk, issue #1337. The package is still in the
review process.
Best
Krutik
From: Shepherd, Lori
Sent: 18 February 2020 13:00
To: Krutik Patel (PGR) ; bioc-devel@r-project.org
Subject: Re: Changing the name of your package
Hi to all,
This is Minoo Ashtiani the maintainer of "IMMAN" software package. My
git-hub account is changed from "Minoo-Ashtiani" to "Minoo-ASTY". Now I
want to update the package using my new account however I cant. When I want
push to the origin I faced this errors:
git push origin master
A few clarification points:
What is the name of your package?
Has your package already been accepted into Bioconductor or is it still in the
review process?
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm &
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