Dear Nitesh,
Thanks for the quick replies. And sorry for mixing your first and last name up.
:)
Well, we'd like to reserve 2.0.0 of our package for a "big feature update". But
after some local testing we found a few bugs we cannot easily resolve. I
already pushed those changes to the
I suggest you go forward with the version numbering.
1.99.0 --> 1.99.1
At the next release your package will have 2.0.0. Take a look at the version
numbering document
http://bioconductor.org/developers/how-to/version-numbering/.
Make the changes you need to and go to version number 1.99.1.
Dear Turaga,
How do you suggest I do the equivalent of reverting a commit?
My package name is MutationalPatterns.
Kind regards,
Roel Janssen
On Mon, 2020-03-02 at 17:40 +, Turaga, Nitesh wrote:
> Hi Roel,
>
> You cannot revert on the Git Bioconductor repo.
>
> What is your package name?
Hi Roel,
You cannot revert on the Git Bioconductor repo.
What is your package name?
> On Mar 2, 2020, at 10:51 AM, Roel Janssen wrote:
>
> Dear Bioconductor developers,
>
> I'd like to revert the changes I made on the development branch
> ("master" in Git), but a pre-receive hook that
Dear Bioconductor developers,
I'd like to revert the changes I made on the development branch
("master" in Git), but a pre-receive hook that checks version numbers
prevents me from reverting the change:
remote: Error: Illegal version bump from '1.99.0' to '1.13.0'
The commit I am trying to
Got it! Thanks!
On Mon, Mar 2, 2020 at 10:11 AM Levi Waldron
wrote:
> Let's say 11:59 pm in the time zone of your choice :) In practice, the
> Google Forms will get closed to further submissions sometime on March 4
> when it is no longer March 3 anywhere.
>
> On Mon, Mar 2, 2020 at 2:58 PM
Let's say 11:59 pm in the time zone of your choice :) In practice, the
Google Forms will get closed to further submissions sometime on March 4
when it is no longer March 3 anywhere.
On Mon, Mar 2, 2020 at 2:58 PM Simina Boca wrote:
> Is the deadline 11:59 pm tomorrow or another time?
>
>
Hi!
Hope this finds you well!
I was told to contact this mailing list about preparing/changing a package for
Bioconductor submission.
My question is: How should I store large dependency files - 6GB large (e.g.
1000 genomes reference LD data) - for the package on Bioconductor?
My package
Is the deadline 11:59 pm tomorrow or another time?
Thanks!
Cheers,
Simina
On Mon, Mar 2, 2020, 8:08 AM Shepherd, Lori
wrote:
> Reminder: TOMORROW March 3rd is the last day to submit proposals for
> Bioc2020 workshops/talks/posters!
> http://bioc2020.bioconductor.org/call-for-abstracts
>
>
>
Hi,
We allow only one maintainer per package. Please take a look at the
instructions at this link,
http://bioconductor.org/developers/package-guidelines/#description.
Both you and your colleague can remain an authors but you should remove one of
the names as maintainer.
For this reason you
Reminder: TOMORROW March 3rd is the last day to submit proposals for Bioc2020
workshops/talks/posters! http://bioc2020.bioconductor.org/call-for-abstracts
Lori Shepherd
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton
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