Re: [Bioc-devel] Subscription to the list problem

2020-06-11 Thread ELENI ADAM
Martin, Thank you very much for your response. It turned out that the confirmation emails were being blocked by the email servers. The ITS released the emails and I was finally able to subscribe. Kind regards, Eleni On Thu, Jun 11, 2020 at 6:08 AM Martin Maechler wrote: > > ELENI ADAM >

[Bioc-devel] netDx: Build errors despite code working in BioC docker

2020-06-11 Thread Shraddha Pai
Hello BioC community, I have been trying unsuccessfully for a week now to update both release and dev branches of the netDx packages but am still getting build errors. Today I got a build error for the release branch:

Re: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it

2020-06-11 Thread Bhagwat, Aditya
Thankyou Lori, Nitesh, So you are saying is that * upstream/RELEASE_*_* is created from your end with the next BioC release. * The git error message arises because upstream/RELEASE_3_11 does not exist to copy the contents of (locally created) RELEASE_3_11 into. The points under

Re: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it

2020-06-11 Thread Shepherd, Lori
Newly accepted packages are added into devel only. They will be a release branch as soon as the next scheduled Bioconductor release occurs. Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets

Re: [Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it

2020-06-11 Thread Nitesh Turaga
Hi Aditya, http://bioconductor.org/developers/how-to/git/faq/ #14 would give me more information on how to help you with this issue. Best, Nitesh > On Jun 11, 2020, at 12:15 PM, Bhagwat, Aditya > wrote: > > Dear Bioc Core, > > Thank

[Bioc-devel] fatal: 'upstream/RELEASE_3_11' is not a commit and a branch 'RELEASE_3_11' cannot be created from it

2020-06-11 Thread Bhagwat, Aditya
Dear Bioc Core, Thank you for accepting multicrispr on BioC. I was going through the instructions on how to sync existing repositories. All instructions up to

[Bioc-devel] Fwd: safe: Bioc build error in release and devel

2020-06-11 Thread Nitesh Turaga
Hi, This is just following up that this issue has been resolved. Best, Nitesh > Begin forwarded message: > > From: Ludwig Geistlinger > Subject: Re: safe: Bioc build error in release and devel > Date: June 10, 2020 at 5:30:45 PM EDT > To: Nitesh Turaga > Cc: "Shepherd, Lori" > > Thanks,

Re: [Bioc-devel] Subscription to the list problem

2020-06-11 Thread Martin Maechler
> ELENI ADAM > on Tue, 9 Jun 2020 17:24:49 -0400 writes: > Hello, I have tried multiple times to subscribe to the > bioc-devel list by filling out the web form > (https://stat.ethz.ch/mailman/listinfo/bioc-devel) but I > have never received a confirmation email (I