[Bioc-devel] Question for scheduled release

2020-10-09 Thread Yang,Peng
Dear Bioconductor team, I am the maintainer for DeMixT package (1.5.0 in devel, 1.4.0 in release currently). Here I have a question for release schedule. I notice the scheduled new devel Bioc 3.13 is Oct 13th, does that mean if I want to push a new version 1.7.0 on devel, I need to wait for

Re: [Bioc-devel] Remove Windows support for a package

2020-10-09 Thread Lei Huang
Thank you very much Lori! -Lei On Fri, Oct 9, 2020 at 7:31 AM Kern, Lori wrote: > I would consider if your package really needs to depend on the dependent > package or if there are alternative solutions. Not supporting on windows > will make your package not useful for a large portion of the

Re: [Bioc-devel] Reset BioCredentials

2020-10-09 Thread Lei Huang
Hi Nitesh, I can access the repo now. Thanks again for your help. Best, Lei On Fri, Oct 9, 2020 at 10:37 AM Turaga, Nitesh < nitesh.tur...@roswellpark.org> wrote: > Hi Lei, > > This is resolved. Please check again to make sure it is reflected on your > end. > > Best, > > Nitesh > > On Oct 9,

[Bioc-devel] Package Code Freeze for Release Bioconductor 3.11 Tuesday October 13th!

2020-10-09 Thread Kern, Lori
This is a reminder, The Release Bioc 3.11 Code Freeze will occur on this coming Tuesday October 13th. All changes to the Bioconductor versions of packages on the RELEASE_3_11 branch must be pushed up before the freeze. Bioconductor does not allow changes to past versions of packages so this

Re: [Bioc-devel] Reset BioCredentials

2020-10-09 Thread Turaga, Nitesh
Hi Lei, This is resolved. Please check again to make sure it is reflected on your end. Best, Nitesh On Oct 9, 2020, at 12:46 AM, Lei Huang mailto:lhuang1...@gmail.com>> wrote: Dear Nitesh, Thanks for the help! I was able to update my email address for package methyAnalysis and lumi.

Re: [Bioc-devel] EXTERNAL: Fwd: 'reactome.db' Bioconductor package

2020-10-09 Thread Willem Ligtenberg via Bioc-devel
Hi Kayla, Super, I have now added a reminder for myself in my calendar each 6 months. Luckily Bioconductor has a predictable release schedule. :) Unfortunately, that is what happens when you are hosting your own email server. Most notably Microsoft labels small mailserver as mine as possible

Re: [Bioc-devel] Remove Windows support for a package

2020-10-09 Thread Kern, Lori
I would consider if your package really needs to depend on the dependent package or if there are alternative solutions. Not supporting on windows will make your package not useful for a large portion of the Bioconductor community. That said... You can add a hidden file to the top level of the

Re: [Bioc-devel] EXTERNAL: Fwd: 'reactome.db' Bioconductor package

2020-10-09 Thread Interdonato, Kayla
Sorry about that, your original email landed in my spam for some reason. I'll be sure to take care of reactome.db for this release. Best, Kayla On 10/8/20, 2:55 PM, "Bioc-devel on behalf of Willem Ligtenberg via Bioc-devel" wrote: Hi, Since I haven't heard back from Kayla, also