Hello,
I took over the maintenance of the `fastseg` package and would like to request
un-deprecation of the fastseg package.
Best
Alexander Blume
> Begin forwarded message:
>
> From: Nitesh Turaga
> Subject: Re: fastseg Bioconductor package
> Date: 17. May 2022 at 19:26:53 CEST
> To: Alexander Blume
> Cc: fast...@bioinf.jku.at, Günter Klambauer
>
> Please email the mailing list now, bioc-devel@r-project.org.
>
> This request will be handled most likely next week by Lori Shepherd.
>
> Nitesh Turaga
> Scientist II, Department of Data Science,
> Bioconductor Core Team Member
> Dana Farber Cancer Institute
>
>> On May 17, 2022, at 1:23 PM, Alexander Blume wrote:
>>
>> Dear Nitesh,
>>
>> I set myself as the new maintainer and would like to un-deprecate the
>> fastseg package.
>>
>> Best
>> Alex
>>
>>
>>
>>> On 17. May 2022, at 18:31, Alexander Blume wrote:
>>>
>>> Hi Günter,
>>>
>>> Thanks for this smooth transition.
>>>
>>> In terms of changes to the DESCRIPTION file, I can just put myself as the
>>> new maintainer.
>>>
>>> However, I was wondering if you are planning to keep the linked website
>>> alive for the near future?
>>> If yes, I would also update the respective link to
>>> http://www.bioinf.jku.at/software/fastseg/index.html .
>>>
>>> Best
>>> Alex
>>>
On 17. May 2022, at 18:14, Nitesh Turaga wrote:
You can also do
ssh -T g...@git.bioconductor.org | grep ‘fastseg’
You should see R W (read and write)
Nitesh Turaga
Scientist II, Department of Data Science,
Bioconductor Core Team Member
Dana Farber Cancer Institute
> On May 17, 2022, at 12:08 PM, Alexander Blume
> wrote:
>
> Dear Nitesh,
>
> How exactly should I check my access to the fastseg package?
>
> FYI, I am able to fetch the repo using `git clone
> g...@git.bioconductor.org:packages/fastseg`.
>
> Best
> Alex
>
>
>> On 17. May 2022, at 17:57, Nitesh Turaga wrote:
>>
>> Hi Günter,
>>
>> I’ve added Alexander (BiocCredentials id: a.gosdschan) to the package.
>>
>> Please ask him to check if he can access the package.
>>
>> You would also need to change the maintainer on the DESCRIPTION file of
>> the package.
>>
>> Best
>>
>> Nitesh
>>
>>
>> Nitesh Turaga
>> Scientist II, Department of Data Science,
>> Bioconductor Core Team Member
>> Dana Farber Cancer Institute
>>
>>> On May 17, 2022, at 6:18 AM, Günter Klambauer
>>> wrote:
>>>
>>> Dear Bioconductor team, dear Nithesh,
>>>
>>> I would like to hand over maintenance of the package "fastseg" to
>>> Alexander Blume (CC). Is this possible? What do we need? (i've done
>>> this before with cn.mops which was handed over to one of my
>>> colleagues).
>>>
>>> Best,
>>> Günter
>>>
>>>
>>> On 25.03.22 18:58, nturaga.b...@gmail.com wrote:
fastseg Bioconductor Package Notification
Nitesh Turaga1
1Dana Farber Cancer Institute, Boston, MA, USA
March 25, 2022
Package: fastseg
Hi Guenter Klambauer,
I am contacting you concerning the fastseg package, on the release and
devel branch of Bioconductor, for which you are listed as the
maintainer.
The latest build/check report shows that your package is failing on
one or more platforms. Please resolve the issues before the next
Bioconductor release for your package’s continued inclusion in
Bioconductor.
https://bioconductor.org/checkResults/release/bioc-LATEST/fastseg/https://bioconductor.org/checkResults/devel/bioc-LATEST/fastseg/
Please let me know if you have any questions.
Regards,
Nitesh
Bioconductor Core Team
Scientist II
Dana Farber Cancer Institute
Data Science
Boston, MA
>>>
>>>
>>> --
>>> Günter Klambauer, PhD
>>> Assistant professor for Artificial Intelligence in Life Sciences
>>> ELLIS scholar (
>>> ellis.eu
>>> )
>>> Head of department "Machine Learning" at the Austrian Society for
>>> Artificial Intelligence (ASAI)
>>> LIT AI Lab & Institute for Machine Learning
>>> Johannes Kepler University, Linz, Austria
>>>
>>> https://www.jku.at/en/institute-for-machine-learning/about-us/team/assist-prof-mag-dr-guenter-klambauer
>>
>
>>>
>>
>
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