Re: [Bioc-devel] seqArchR error on build systems

Hi Sarvesh, It looks like reticulate somehow was using the wrong Python instance on nebbiolo2 and lconway, as reported by py_config(). We're now setting RETICULATE_PYTHON on those machines to make sure that reticulate will use the correct Python. This change was made after the builds

Re: [Bioc-devel] Package dependencies error during BiocCheck

Hi Marcel, Thanks for the reply. Is there a way to opt for this solution on the bioc new pkg build systems? If not, then, I guess, I will have to wait until it goes away for my bioc submission to be reviewed further? Thanks and best, Sarvesh On Tue, 25 Oct 2022, 18:14 Marcel Ramos, wrote:

Re: [Bioc-devel] Package dependencies error during BiocCheck

Hi Sarvesh, The error has something to do with an interaction between internal base R code and checking for dependencies in BiocCheck with `loadNamespace`. Either way, this check in BiocCheck is redundant with R CMD check. It will soon get removed but for now, you can disable it by running:

[Bioc-devel] Package dependencies error during BiocCheck

Hi all, I am trying to resolve an issue with dependencies of my package which is under review at the moment (Issue 2790 , latest report ). I was wondering

[Bioc-devel] seqArchR error on build systems

Hi Bioc-team, seqArchR was building fine, without any errors last week, but I am seeing an error again. This time it is due to the Python module 'sklearn' not available and one another error. The sklearn-related error occurs on nebbiolo2 and Iconway, while palomino4 shows a different error.