Re: [Bioc-devel] Issue with setting Maintainer in new package submission

2023-02-22 Thread Mike Smith
Hi Andrew, Perhaps I'm not understanding your workflow correctly, but it looks like your email in the DESCRIPTION that was uploaded to the Bioc submission system is an @dfci.harvard.edu one. That's what I see at https://github.com/NKInstinct/flowGate/blob/master/DESCRIPTION and it is the same if

[Bioc-devel] Issue with setting Maintainer in new package submission

2023-02-22 Thread Andrew Wight
Hi all - I've just had my new package submission error on build with ERROR: Maintainer must register at the support site; visit https://support.bioconductor.org/accounts/signup/ However, I am registered on the support site, so I think I've specified the maintainer wrong somehow in the

Re: [Bioc-devel] Java version on merida1?

2023-02-22 Thread Jennifer Wokaty
These are the results for merida1: merida1$ java --version openjdk 18.0.1.1 2022-04-22 OpenJDK Runtime Environment (build 18.0.1.1+2-6) OpenJDK 64-Bit Server VM (build 18.0.1.1+2-6, mixed mode, sharing) Jennifer Wokaty (they/them) Waldron Lab at CUNY SPH Bioconductor Core Team

[Bioc-devel] Java version on merida1?

2023-02-22 Thread Shraddha Pai
Hello BioC community, What’s the Java version installed on Merida1? I have a package failing build specifically on that macOS machine (has worked with older versions of BioC) and I suspect it’s got a newer version of Java, but want to rule out other possibilities. Thanks,Shraddha -- Shraddha

Re: [Bioc-devel] [EXTERNAL] Re: Question on prospective Bioc package

2023-02-22 Thread Flanigan, Greg (NIH/NCI) [C] via Bioc-devel
Dear Wolfgang and Sutirtha, Excellent, thank you for confirming this! There has been a fair amount of back and forth in the development team about whether to push for Bioconductor or not. We’ll proceed with putting it together to submit to Bioconductor. Best wishes, Greg From: SUTIRTHA

Re: [Bioc-devel] Question on prospective Bioc package

2023-02-22 Thread SUTIRTHA CHAKRABORTY via Bioc-devel
Seems like this would be a great contribution. Best Regards Sutirtha On Wednesday, 22 February 2023, 03:02:52 PM IST, Wolfgang Huber wrote: Dear Greg This sounds like a typical use case for a Bioconductor package. Simplicity is a not a bad thing—robust, well-engineered building

Re: [Bioc-devel] Question on prospective Bioc package

2023-02-22 Thread Wolfgang Huber
Dear Greg This sounds like a typical use case for a Bioconductor package. Simplicity is a not a bad thing—robust, well-engineered building blocks that do one thing really well are IMHO often more useful to many than big integrated complex jack of all trades. Thanks and best wishes Wolfgang