Hey, Will the package be ok for the new release even though I still get the same error?
Cheers, Sokratis On Thu, Aug 17, 2023 at 3:38 PM Mike Smith <grimbo...@gmail.com> wrote: > Hi Sokratis, > > You've address the problems successfully in the devel branch (3.18) but > they remain in the release (3.17), so you're probably still getting the > messages relating to these builds ( > https://bioconductor.org/checkResults/3.17/bioc-LATEST/omada/). > > To fix this you'll need to checkout the RELEASE_3_17 branch, and then make > the same changes you've already applied. You can either do that via git > cherry-pick and select the appropriate commits from devel branch, or > perhaps more straightforward is to just copy/paste the relevant sections. > Then bump the RELEASE_3_17 version number to 1.2.1 and push that branch. > Hopefully this will fix the issues there too. > > Best, > Mike > > On Thu, 17 Aug 2023 at 03:47, Sokratis Kariotis < > sokratiskario...@gmail.com> wrote: > >> Hey all, >> >> I can see all is green but I still get messages about failing builds and >> on >> the website shows build error. Do I still have to do something? Thanks in >> advance. >> >> Regards, >> Sokratis >> >> On Thu, Aug 10, 2023 at 2:53 PM Martin Grigorov < >> martin.grigo...@gmail.com> >> wrote: >> >> > Hi, >> > >> > All is green at >> > https://bioconductor.org/checkResults/3.18/bioc-LATEST/omada/ >> > >> > Regards, >> > Martin >> > >> > On Thu, Aug 10, 2023 at 9:44 AM Sokratis Kariotis < >> > sokratiskario...@gmail.com> wrote: >> > >> >> Hey all, >> >> >> >> Is this fixed now? I think I can see all pass, but on the actual >> website >> >> its still on error. Thanks! >> >> >> >> Cheers, >> >> Sokratis >> >> >> >> On Tue, Aug 1, 2023 at 4:25 PM Sokratis Kariotis < >> >> sokratiskario...@gmail.com> wrote: >> >> >> >>> Hey, >> >>> >> >>> I believe I have resolved the conflicts and now can run: *git push >> >>> upstream main:devel* >> >>> with Everything up-to-date as a result. However, *git push origin >> main* >> >>> does not yield >> >>> anything and it keeps hanging without a message. I checked >> https://bioconductor.org/checkResults/3.18/bioc-LATEST/omada/ >> >>> and the last commit is April. >> >>> >> >>> >> >>> On Mon, Jul 31, 2023 at 10:01 PM Kern, Lori < >> >>> lori.sheph...@roswellpark.org> wrote: >> >>> >> >>>> You'll need to find the merge conflicts and resolve them. Recommit >> >>>> those files and then it should go. >> >>>> >> >>>> Lori Shepherd - Kern >> >>>> >> >>>> Bioconductor Core Team >> >>>> >> >>>> Roswell Park Comprehensive Cancer Center >> >>>> >> >>>> Department of Biostatistics & Bioinformatics >> >>>> >> >>>> Elm & Carlton Streets >> >>>> >> >>>> Buffalo, New York 14263 >> >>>> ------------------------------ >> >>>> *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of >> >>>> Sokratis Kariotis <sokratiskario...@gmail.com> >> >>>> *Sent:* Monday, July 31, 2023 7:27 AM >> >>>> *To:* Martin Grigorov <martin.grigo...@gmail.com> >> >>>> *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org> >> >>>> *Subject:* Re: [Bioc-devel] Omada package failing due to removed >> >>>> dependency >> >>>> >> >>>> Tried but its Already up to date. >> >>>> >> >>>> On Mon, 31 Jul 2023, 7:22 pm Martin Grigorov, < >> >>>> martin.grigo...@gmail.com> >> >>>> wrote: >> >>>> >> >>>> > Hi Sokratis, >> >>>> > >> >>>> > You need to do "git pull --rebase" before trying to push. >> >>>> > Most probably the version has been bumped upstream. >> >>>> > >> >>>> > Regards, >> >>>> > Martin >> >>>> > >> >>>> > On Mon, Jul 31, 2023 at 2:16 PM Sokratis Kariotis < >> >>>> > sokratiskario...@gmail.com> wrote: >> >>>> > >> >>>> >> Hey all, >> >>>> >> >> >>>> >> I created a new key and now I can commit etc but there is a >> conflict >> >>>> that >> >>>> >> is not allowing me to go ahead. >> >>>> >> >> >>>> >> My commands: >> >>>> >> git add . >> >>>> >> git commit -m "Update metrics" >> >>>> >> git push upstream main:devel >> >>>> >> >> >>>> >> *The above results in the following error:* >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> *Enumerating objects: 19, done.Counting objects: 100% (17/17), >> >>>> done.Delta >> >>>> >> compression using up to 16 threadsCompressing objects: 100% >> (11/11), >> >>>> >> done.Writing objects: 100% (11/11), 4.78 KiB | 4.78 MiB/s, >> >>>> done.Total 11 >> >>>> >> (delta 7), reused 0 (delta 0), pack-reused 0remote: Error: You >> >>>> cannot push >> >>>> >> without resolving merge conflicts.remote:remote: Please check the >> >>>> files in >> >>>> >> the commit pushed to the git-serverremote: for merge conflict >> >>>> markers like >> >>>> >> '<<<<<<<', '========', '>>>>>>>'.remote:To >> >>>> >> git.bioconductor.org:packages/omada ! [remote rejected] main -> >> >>>> devel >> >>>> >> (pre-receive hook declined)error: failed to push some refs to >> >>>> >> 'git.bioconductor.org:packages/omada'* >> >>>> >> >> >>>> >> >> >>>> >> >> >>>> >> On Mon, Jul 31, 2023 at 3:36 PM Mike Smith <grimbo...@gmail.com> >> >>>> wrote: >> >>>> >> >> >>>> >> > Hi Sokratis, >> >>>> >> > >> >>>> >> > Everything in Bioconductor is built around the central >> >>>> Bioconductor git >> >>>> >> > repositories. The only way to get changes out to users is to >> >>>> commit >> >>>> >> them >> >>>> >> > to git.bioconductor.org and then the build system will pick >> those >> >>>> up, >> >>>> >> run >> >>>> >> > the tests and checks, create new versions of packages, and make >> >>>> them >> >>>> >> > available for distribution. >> >>>> >> > >> >>>> >> > Perhaps you can include the git command you're running to submit >> >>>> the >> >>>> >> > changes and a copy of the exact error you're receiving. That >> >>>> might help >> >>>> >> > the team suggest a solution. >> >>>> >> > >> >>>> >> > Best regards, >> >>>> >> > Mike >> >>>> >> > >> >>>> >> > On Fri, 28 Jul 2023 at 08:32, Sokratis Kariotis < >> >>>> >> > sokratiskario...@gmail.com> wrote: >> >>>> >> > >> >>>> >> >> Hey both, >> >>>> >> >> >> >>>> >> >> I have edited the package code but I'm having some difficulties >> >>>> >> pushing it >> >>>> >> >> to trigger another build (github passphrase). Is there another >> >>>> way to >> >>>> >> >> trigger the build? Thanks! >> >>>> >> >> >> >>>> >> >> Cheers, >> >>>> >> >> Sokratis >> >>>> >> >> >> >>>> >> >> On Wed, Jul 12, 2023 at 1:43 AM Kern, Lori < >> >>>> >> lori.sheph...@roswellpark.org >> >>>> >> >> > >> >>>> >> >> wrote: >> >>>> >> >> >> >>>> >> >> > We can give you a little more time (a few weeks) to fix the >> >>>> package >> >>>> >> but >> >>>> >> >> > please fix as soon as possible to avoid deprecation. >> >>>> >> >> > >> >>>> >> >> > Cheers, >> >>>> >> >> > >> >>>> >> >> > Lori Shepherd - Kern >> >>>> >> >> > >> >>>> >> >> > Bioconductor Core Team >> >>>> >> >> > >> >>>> >> >> > Roswell Park Comprehensive Cancer Center >> >>>> >> >> > >> >>>> >> >> > Department of Biostatistics & Bioinformatics >> >>>> >> >> > >> >>>> >> >> > Elm & Carlton Streets >> >>>> >> >> > >> >>>> >> >> > Buffalo, New York 14263 >> >>>> >> >> > ------------------------------ >> >>>> >> >> > *From:* Sokratis Kariotis <sokratiskario...@gmail.com> >> >>>> >> >> > *Sent:* Monday, July 10, 2023 10:27 AM >> >>>> >> >> > *To:* Kern, Lori <lori.sheph...@roswellpark.org> >> >>>> >> >> > *Cc:* Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com>; >> >>>> >> >> > bioc-devel@r-project.org <bioc-devel@r-project.org> >> >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to >> removed >> >>>> >> >> > dependency >> >>>> >> >> > >> >>>> >> >> > Hey both, >> >>>> >> >> > >> >>>> >> >> > I have checked the package license (GPL) and it should be >> fine >> >>>> to use >> >>>> >> >> the >> >>>> >> >> > code. However, I am having difficulty finding the actual >> code to >> >>>> >> >> calculate >> >>>> >> >> > the internal metrics I am using (used in Omada's function >> >>>> >> >> > cluster_voting.R). I can only find the wrapper function but >> not >> >>>> the >> >>>> >> ones >> >>>> >> >> > that actually calculate the metrics. I am not sure how to >> >>>> proceed >> >>>> >> with >> >>>> >> >> this >> >>>> >> >> > in time, so the Omada package won't get deprecated. >> >>>> >> >> > >> >>>> >> >> > Regards, >> >>>> >> >> > Sokratis >> >>>> >> >> > >> >>>> >> >> > On Fri, Jul 7, 2023 at 1:03 AM Kern, Lori < >> >>>> >> >> lori.sheph...@roswellpark.org> >> >>>> >> >> > wrote: >> >>>> >> >> > >> >>>> >> >> > We would not hunt down the lab especially for CRAN packages, >> >>>> but you >> >>>> >> >> > could reach out if you like. That would probably be a >> >>>> recommended >> >>>> >> >> action >> >>>> >> >> > to either ask someone from their lab to maintain or if you >> are >> >>>> >> willing >> >>>> >> >> and >> >>>> >> >> > you really want the package around you could ask the lab if >> >>>> they mind >> >>>> >> >> you >> >>>> >> >> > volunteering to be the new maintainer. >> >>>> >> >> > >> >>>> >> >> > There could see two options for rewriting/maintaining. >> >>>> >> >> > >> >>>> >> >> > 1. Take over maintenance of the package and resubmit to CRAN >> >>>> >> >> > It's a little tricky cause this is a CRAN package so I'm not >> >>>> sure on >> >>>> >> >> their >> >>>> >> >> > exact policy of taking over an abandoned package. If this is >> >>>> >> desired, I >> >>>> >> >> > would reach out to CRAN to find out their exact policy >> >>>> >> >> > 2. Move needed code to your Bioconductor package >> >>>> >> >> > You'll have to check the original package license to make >> sure >> >>>> this >> >>>> >> is >> >>>> >> >> > allowed under the license of the package. You will still want >> >>>> to give >> >>>> >> >> the >> >>>> >> >> > original authors/maintainer credit. I would say to be safe I >> >>>> would >> >>>> >> >> include >> >>>> >> >> > them as contributors/authors in the DESCRITPION Authors@R >> >>>> field and >> >>>> >> in >> >>>> >> >> > the R code I would add a comment above the code to reference >> >>>> original >> >>>> >> >> > package citation and stating it was copied from there. I'm >> not >> >>>> a >> >>>> >> >> lawyer or >> >>>> >> >> > license/copy right expert so not sure if that would be good >> >>>> enough >> >>>> >> but >> >>>> >> >> that >> >>>> >> >> > would be my take on it. >> >>>> >> >> > >> >>>> >> >> > Lori Shepherd - Kern >> >>>> >> >> > >> >>>> >> >> > Bioconductor Core Team >> >>>> >> >> > >> >>>> >> >> > Roswell Park Comprehensive Cancer Center >> >>>> >> >> > >> >>>> >> >> > Department of Biostatistics & Bioinformatics >> >>>> >> >> > >> >>>> >> >> > Elm & Carlton Streets >> >>>> >> >> > >> >>>> >> >> > Buffalo, New York 14263 >> >>>> >> >> > ------------------------------ >> >>>> >> >> > *From:* Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com> >> >>>> >> >> > *Sent:* Thursday, July 6, 2023 1:58 AM >> >>>> >> >> > *To:* Sokratis Kariotis <sokratiskario...@gmail.com> >> >>>> >> >> > *Cc:* Kern, Lori <lori.sheph...@roswellpark.org>; >> >>>> >> >> bioc-devel@r-project.org >> >>>> >> >> > <bioc-devel@r-project.org> >> >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to >> removed >> >>>> >> >> > dependency >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> https://secure-web.cisco.com/1EhksuB6k_yI--kj3_CN8LCovo7wAy9Epj-_8W4VV7FAbktome6nKnRrktDrrzsGXq6OrPZzxo7-CPAnrnZ4mFbi1Z-z81fIELFunE2pI8wuUlGU72f4Irnh1TjSXymZHtkM8_5OEv8EPAA1U7i6tUetGY5G8ZODgjnDQZaarKkEspvU92RNlxjLqzIKy-vIrX-TN-TtC-dDyaqOyIVUNZKJws7sU-V4VFjfkwoM5rK9BAdI4jIqcxygwdSeB5XsZftYZVy7nlTD1Rrp46lnGBMqvfBpVOQjd93wM9KQU1nafzbzIag4rrGGGlr_D4ZWB/https%3A%2F%2Fnonstationarity.sciencesconf.org%2Fresource%2Fpage%2Fid%2F7 >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1pCvxIL3lfzw2yMAoq1pXQ5JiavYeyZHI2qtDauHw4xwZZBxaV-dAKGWcVKgwz09vF4YJJGVvkcQloDj0mJOUxj7BI3WPu_1Ze3vDW0a9syxuRsiQNOGsRkJ8BaWBdlxOdRBAw39KujDDGqb_DPfL6IsjHK5UCqoCpzw39GduVcBLFIutoPM8Nqjgp8ArDuh-oK-Bxe-huDYCoLXUX5GyU_fEG81AEtF-osCFtJNLRiQBggrsxcViF8mNihzVj8-UT4cNawHmz7xye_KNs45WZOxnVljiq5QQHuIGCeXRkbYBUvrpcEoTootlVxLloYK0/https%3A%2F%2Fnonstationarity.sciencesconf.org%2Fresource%2Fpage%2Fid%2F7 >> >>>> >> >> > >> >>>> >> >> > That is, perhaps, not surprising... >> >>>> >> >> > >> >>>> >> >> > Package seems to be too good to be abandoned. I wonder if >> >>>> anyone from >> >>>> >> >> > their lab >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1IisY82Mh0-7_0tTgq7v7MgjvGFKIBucg15oqE_SNpUPzwuvYYaCPgz427Efo9Xga7j3PYM6msIsM8GJAK7ofsjmhrfAG3_kBGCmTdF0gVYBUz17CdZjNygLUpDMXPSt6h5CfKAjX_SrymhwTWvvEuyH1cH3nCYhVkVd5xfdd2W5azA0g9MJ4bPASnxJwY9quFxu_6CAIuYXkkO_DqiO9NC6Nb22USMev1V4qh5A3IX2kg6l60sRbM9gDQWjNwbJAPSnWq9G5setIw9CNP8avnjON5nhm_cjNhhn6s6kY07wwiSQ4sSQqsekskzOjhbm1/https%3A%2F%2Fmodalx.parisnanterre.fr%2Fmembres >> >>>> >> >> > >> >>>> >> >> > could take over maintenance, if you still bother to ask... >> >>>> >> >> > >> >>>> >> >> > Best, >> >>>> >> >> > Oleksii >> >>>> >> >> > >> >>>> >> >> > On Thu, 6 Jul 2023 at 06:23, Sokratis Kariotis < >> >>>> >> >> sokratiskario...@gmail.com> >> >>>> >> >> > wrote: >> >>>> >> >> > >> >>>> >> >> > Hey, >> >>>> >> >> > >> >>>> >> >> > I haven't received any responses from the maintainer of >> >>>> ClusterCrit >> >>>> >> so I >> >>>> >> >> > guess I will have to re-write the code used. How can I >> properly >> >>>> go >> >>>> >> about >> >>>> >> >> > this and credit the authors as well? Thanks! >> >>>> >> >> > >> >>>> >> >> > Cheers, >> >>>> >> >> > Sokratis >> >>>> >> >> > >> >>>> >> >> > On Thu, Jun 29, 2023 at 7:38 PM Kern, Lori < >> >>>> >> >> lori.sheph...@roswellpark.org> >> >>>> >> >> > wrote: >> >>>> >> >> > >> >>>> >> >> > We do not allow archived packages to be used. All >> dependencies >> >>>> must >> >>>> >> be >> >>>> >> >> on >> >>>> >> >> > CRAN or Bioconductor. So yes if you can get them to reinstate >> >>>> the >> >>>> >> >> package >> >>>> >> >> > on CRAN that would be ideal. If not you will have to remove >> the >> >>>> >> package >> >>>> >> >> > from the dependency list and either re-write the code used >> >>>> (giving >> >>>> >> >> original >> >>>> >> >> > clusterCrit authors credit) or remove the functionality used >> >>>> from >> >>>> >> that >> >>>> >> >> > package. >> >>>> >> >> > >> >>>> >> >> > Lori Shepherd - Kern >> >>>> >> >> > >> >>>> >> >> > Bioconductor Core Team >> >>>> >> >> > >> >>>> >> >> > Roswell Park Comprehensive Cancer Center >> >>>> >> >> > >> >>>> >> >> > Department of Biostatistics & Bioinformatics >> >>>> >> >> > >> >>>> >> >> > Elm & Carlton Streets >> >>>> >> >> > >> >>>> >> >> > Buffalo, New York 14263 >> >>>> >> >> > ------------------------------ >> >>>> >> >> > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on >> >>>> behalf of >> >>>> >> >> > Oleksii Nikolaienko <oleksii.nikolaie...@gmail.com> >> >>>> >> >> > *Sent:* Thursday, June 29, 2023 5:36 AM >> >>>> >> >> > *To:* Sokratis Kariotis <sokratiskario...@gmail.com> >> >>>> >> >> > *Cc:* bioc-devel@r-project.org <bioc-devel@r-project.org> >> >>>> >> >> > *Subject:* Re: [Bioc-devel] Omada package failing due to >> removed >> >>>> >> >> > dependency >> >>>> >> >> > >> >>>> >> >> > Hi, >> >>>> >> >> > in this case maybe it's worth reaching out to the maintainer >> of >> >>>> >> >> > clusterCrit. It was removed from CRAN because of >> (seems-to-be) >> >>>> minor >> >>>> >> >> > warnings, which can be addressed by the clusterCrit developer >> >>>> in no >> >>>> >> >> time... >> >>>> >> >> > >> >>>> >> >> > Best, >> >>>> >> >> > Oleksii >> >>>> >> >> > >> >>>> >> >> > On Thu, 29 Jun 2023 at 08:44, Sokratis Kariotis < >> >>>> >> >> > sokratiskario...@gmail.com> >> >>>> >> >> > wrote: >> >>>> >> >> > >> >>>> >> >> > > Dear Bioconductor team, >> >>>> >> >> > > >> >>>> >> >> > > I received an email that my package "Omada" is failing in >> >>>> release >> >>>> >> and >> >>>> >> >> > > devel. I had a look and the problem seems to be: *ERROR: >> >>>> dependency >> >>>> >> >> > > ‘clusterCrit’ is not available for package ‘omada’*. So the >> >>>> package >> >>>> >> >> > > clusterCrit was removed. Is there a way I can use a >> archived >> >>>> >> version >> >>>> >> >> of >> >>>> >> >> > it >> >>>> >> >> > > (or something similar) so I don't have to rewrite code >> based >> >>>> on new >> >>>> >> >> > > packages to avoid potentially inconsistencies? Please >> advise, >> >>>> thank >> >>>> >> >> you! >> >>>> >> >> > > >> >>>> >> >> > > Cheers, >> >>>> >> >> > > Dr. Sokratis Kariotis (PhD) >> >>>> >> >> > > Agency for Science, Technology and Research (A*STAR) >> >>>> >> >> > > Singapore Immunology Network (SIgN) >> >>>> >> >> > > Twitter: @s_kariotis < >> >>>> >> >> > >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1EqWv8V2N5hRbw3HmoPEY8RdpEeWxqDoUa71DV8jQUiygXZiRjRxTOSFFWWDUSN7nw3Aviue7E_1xQuvbY4J8O3un4nvR0wtrlQUjMbs1vFGt5o9bI_InwlMvRWb2dhIe9ic0_2ugbdCwXwW_RGN1G4LJxUxm_yO9EkGSnc10bfG2fjit4oALm7Y8gMqnFusMJfqR3j-IKbu0Hem-jPRYXIeAurGmn1l7FvPYk9Pi6MHnOl1RN-5x19R655qOhP8vtsh9q-qwvckAbwuklQvq6lo0zKstGTdB6JkFCIIHswJrur4WrdjGMtwrYkWwOAQs/https%3A%2F%2Ftwitter.com%2Fs_kariotis >> >>>> >> >> > > >> >>>> >> >> > > LinkedIn: >> >>>> >> >> > >> >>>> >> >> >> >>>> >> >> >>>> >> http://secure-web.cisco.com/1hrH0VDgCpCKm6BWl_eP9v57iZE2j6Y9RUetJ4RMrKylsFeYV7AWyeBfOewj6SpLxhrD-_JnI4sPdaUJB9Mwxuj-B5ot2FZIu4AU87ty04CdxW8zw9DShqtsaZPm68os9ySeI12kEcN_iujEcY11StQo1_qKeBsQchHO3Vc_qvfAbA2T29jSt4KX0OnG4UZENEfns3cigBqNgiYMOOiCGmz01_nIY5M3cgVbsTmSNA-pov7ZD6si4bOXF6pt-manBCeK0NB13icO5MMlpc8HNxSqkARD7n-R71Sa3ZsGQOIYPgA0uuuIRAR9DbV_F5kSj/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> > > >> >>>> >> >> > > [[alternative HTML version deleted]] >> >>>> >> >> > > >> >>>> >> >> > > _______________________________________________ >> >>>> >> >> > > Bioc-devel@r-project.org mailing list >> >>>> >> >> > > >> >>>> >> >> > >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1CoMZlPPSNe-MfqZkOpNFvpMkwbnIVkEbPIxbET9FKoHMGCVzTeeTdPJGpD4PHivCSzZwalSMt8BeA1_Ab8Pa5gS2jCkg9_onfbYE3UAgbywg5GD1CrAN86qgN8FH4tjTwPBq95yDFIvYCamr14TUrSDkZKUvFhtAw7FR6bpJ_Ub9z2fU6f-G3Xw_FHRqcg6aM9xrpq4GmnfMOKO_Jlf10TJsdvhdReM9Phw2lV_EMy55ZjFYD5bteCpN4_qqRQb4_J6IbFYjlRQEi1A0DiwxC67Gzaf0QPTRszxXRxqPy4oancisQKzNmQJod-2cz9Oa/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> >>>> >> >> > > >> >>>> >> >> > >> >>>> >> >> > [[alternative HTML version deleted]] >> >>>> >> >> > >> >>>> >> >> > _______________________________________________ >> >>>> >> >> > Bioc-devel@r-project.org mailing list >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1CoMZlPPSNe-MfqZkOpNFvpMkwbnIVkEbPIxbET9FKoHMGCVzTeeTdPJGpD4PHivCSzZwalSMt8BeA1_Ab8Pa5gS2jCkg9_onfbYE3UAgbywg5GD1CrAN86qgN8FH4tjTwPBq95yDFIvYCamr14TUrSDkZKUvFhtAw7FR6bpJ_Ub9z2fU6f-G3Xw_FHRqcg6aM9xrpq4GmnfMOKO_Jlf10TJsdvhdReM9Phw2lV_EMy55ZjFYD5bteCpN4_qqRQb4_J6IbFYjlRQEi1A0DiwxC67Gzaf0QPTRszxXRxqPy4oancisQKzNmQJod-2cz9Oa/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > This email message may contain legally privileged and/or >> >>>> confidential >> >>>> >> >> > information. If you are not the intended recipient(s), or the >> >>>> >> employee >> >>>> >> >> or >> >>>> >> >> > agent responsible for the delivery of this message to the >> >>>> intended >> >>>> >> >> > recipient(s), you are hereby notified that any disclosure, >> >>>> copying, >> >>>> >> >> > distribution, or use of this email message is prohibited. If >> >>>> you have >> >>>> >> >> > received this message in error, please notify the sender >> >>>> immediately >> >>>> >> by >> >>>> >> >> > e-mail and delete this email message from your computer. >> Thank >> >>>> you. >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > -- >> >>>> >> >> > Cheers, >> >>>> >> >> > Sokratis Kariotis >> >>>> >> >> > PhD Student >> >>>> >> >> > University of Sheffield, Medical School >> >>>> >> >> > MedTech >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1j_t_6XlNHmK_Mlrd4WRabc9QOpzT2OGES5vH7ZXf-zkhvpeT6fGj6r1c6HMwcYrnxIzGZ6HwikAhhXIh8OkaEgWqigSPXAd_m0NPSjZf7cr7xi4b003k8sYSFAOfwcStP8WCMJQEHURgiHkNDvUmrUdfJYydQO9lMNOyfaP6SnxI2mQX21fOBWIj5wlIAVh9_pBFujbt_XfCBhHL495EtB_s0ntbiowBalE7bhEa4FullCdFTSex4VfICmSriWx91cSPmk1TzmAHv6KZtr7XqAgLH4OzGlGEUTMdjmcrYOoLTC5XpKAljIZMsCwu8hDP/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F >> >>>> >> >> > >> >>>> >> >> > President >> >>>> >> >> > Twitter: @s_kariotis >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/13IN8xWDrADy-iyp1mknOrX5y2tJixhXPBcywL3EoIE7tOUCkSYs7hbAy2slZfzwMH3Bq9AnScXs3HK_KnDOO2kihBQdfM9nIHxnoa1vAkVFfYH8L_ns7w9KGqC0pzUOOxThE_ZMGVWk1LyQyf-RPrv_HY7RqQZo1IEYNirDTKWBu2lkLCH8qvs8lRMm79wx5eRwdZVYNH0uq7g7EcP_vvK9d8vQ534dzt0hOgHaDByQVi2reoXzwifR0pOYP-6LhdI15nbDtZHxMBmTvueysM77gfHBn7_IUHK6y9-biSIidTmH3GlJMkhk83x7UR5Jk/https%3A%2F%2Ftwitter.com%2Fs_kariotis >> >>>> >> >> > >> >>>> >> >> > LinkedIn: >> >>>> >> http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> http://secure-web.cisco.com/1h1oCsLmDI6MQdDDyPKrhabJrDBtBogVZA8wMdTLiZENtCtnsB9UQqak12XHMegX9sP0mimjSxawrR5u0VlKLv-D4lrX8u8A05PST1zfXM9VJX6E41Hj2-TOTZm9uOWc8hfxBrCT6UPjQ0X5pFh0sQRgC5tqu2Ks1EALVXZvSixGddS_zQ2C0bQhnc9KLJe8J3jtxPOkUz7QqCjcwpfgixL9ls_ysxmn2OGFxfiMwTmWgUXWcfWwvOXy6OhfeAl_IDK9USdONEsQETuVSgt7f2eVi5DJJBy_4eVwIVz3GV6iTGr2VjRBlh98HxZMAr-iP/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > This email message may contain legally privileged and/or >> >>>> confidential >> >>>> >> >> > information. If you are not the intended recipient(s), or the >> >>>> >> employee >> >>>> >> >> or >> >>>> >> >> > agent responsible for the delivery of this message to the >> >>>> intended >> >>>> >> >> > recipient(s), you are hereby notified that any disclosure, >> >>>> copying, >> >>>> >> >> > distribution, or use of this email message is prohibited. If >> >>>> you have >> >>>> >> >> > received this message in error, please notify the sender >> >>>> immediately >> >>>> >> by >> >>>> >> >> > e-mail and delete this email message from your computer. >> Thank >> >>>> you. >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > -- >> >>>> >> >> > Cheers, >> >>>> >> >> > Sokratis Kariotis >> >>>> >> >> > PhD Student >> >>>> >> >> > University of Sheffield, Medical School >> >>>> >> >> > MedTech >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1EbU56JtxgdwdoJoUZSkRfzViaYzT5UpVv7Wn4bHXpw7_iNUn_et52ACzsUWbzs2Du309DRo4wtQgGcVuDWVIPx5vtUsOovTfb6A-HIBq3NSje0v9lBELQCeYZvBzjm0t2kAdce_aXnf8m3mH7-cYUd0C6Wu2R7erAmQwuoI22clJuDcztgq-JhMyIczKcN_UhCUNAzJ-b_kHKI3mxzoO76dg0N8g2MIp_pHBC3x0rVQno00wElfOCtr3poLLQZwpcZCTPoAQmYs-Dfin4Lwoy2-B9Qn5txtHoCygaeneDxgiTHVOAuILij26i2Q9cgAQ/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F >> >>>> >> >> > >> >>>> >> >> > President >> >>>> >> >> > Twitter: @s_kariotis >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1RhhMUBj_mRXVHCOKQB6We-WITw332tSjBMu7_BVsJxiUs4tE1EO3zyDwMwygB4WIh8AaEo6gPZZcTCl81Qy6PrClu7SxtC3TbzSz30XZlzOjZukAKbowWtBHiJ36lG-a4U_5dYeM6CKUfdb7MaXesg8oLlZscBYO4fVVKMdcjn0NvtsvF-RfOVtu8tVFiOw6yvb3Rt1g-2xPBcrCEEn69L2z59SnUHY8pboO84aP6YBHHPhMHXw1Quz5J7KfGN3qlcX3kehRg0RIISJKLCdu87PnMhtcbODE0T15xmjyc1mUYKmjlmwghgZF4m-UzFoP/https%3A%2F%2Ftwitter.com%2Fs_kariotis >> >>>> >> >> > >> >>>> >> >> > LinkedIn: >> >>>> >> http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> > < >> >>>> >> >> >> >>>> >> >> >>>> >> http://secure-web.cisco.com/1QlRJ-HwDhYoeQZGt2FCzKpzCEleTeJuBprI0G9qystL3HbJH4unSUkFhwBB5vlm1EWz9u50EG4S0Xnv38OXhu3-ioroUBcS0KG6x7V3cFf73lNR3mJnwnqVqzPtq9gIMtUxwnPPzS6sHVbJhDi2CyejXNt0HoO5oRi4T3Ruca3MN7ZxxXJd2gbyGVGryXBDFLrVBlg3KZ-3_m8AFoTvBpUvWv7fs0vGBQ2lWUXSoQ7JYARZ0vy5mW0a4kK2EzbxCWaOFLR6JcbDwA3T9BO006AtSM2onHVqveK_jx2VZB6CvZsLrR-VJ4j41A8IvYfuQ/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> > >> >>>> >> >> > >> >>>> >> >> > This email message may contain legally privileged and/or >> >>>> confidential >> >>>> >> >> > information. If you are not the intended recipient(s), or the >> >>>> >> employee >> >>>> >> >> or >> >>>> >> >> > agent responsible for the delivery of this message to the >> >>>> intended >> >>>> >> >> > recipient(s), you are hereby notified that any disclosure, >> >>>> copying, >> >>>> >> >> > distribution, or use of this email message is prohibited. If >> >>>> you have >> >>>> >> >> > received this message in error, please notify the sender >> >>>> immediately >> >>>> >> by >> >>>> >> >> > e-mail and delete this email message from your computer. >> Thank >> >>>> you. >> >>>> >> >> > >> >>>> >> >> >> >>>> >> >> >> >>>> >> >> -- >> >>>> >> >> Cheers, >> >>>> >> >> Sokratis Kariotis >> >>>> >> >> PhD Student >> >>>> >> >> University of Sheffield, Medical School >> >>>> >> >> MedTech < >> >>>> >> https://secure-web.cisco.com/1UZJHpVQsI8BfFPWhbq-J2rDlzAewQvgrzEc9WGdF_0K0yiBiLf-It8lbnJnE8RsNZOScd3XkvYSJDp2BZEA9qQ9SiKToJsRHBxjK2bfZLmwCkERBcmUFd9SdoMoB1G4RpEYZFB-1xVSxAPfdiIt_Y4pwfTBtitLHh35siIHmmWTxxGRMgWsScGr5LH7uzLXpK2aU1CTuzOreG-QdW1lDSHVyqJ3QZFGcdCaZ8o8f2qfBdk3hp6oJ7YYYPkFS_RJhwUgAJLPzKq_WYmrO-LvFJowXv0kL7-wJl2HP9iF0xxNvcUL0efR4AUskq7ASlnDR/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F >> >>>> >President >> >>>> >> >> Twitter: @s_kariotis < >> >>>> >> https://secure-web.cisco.com/1wN6YWZ6TrhzA9-XXGwx2WH2adnYr6vcYZGm8DxTnJrVaf7YW-KRmE5ab_OSDfDVhgUW8-M1VUejquNFC3yAsUPME7S2r9j6tBNjLXFYXx8J9c7lM4zLP2wNEVZHJygxBPw07YN2qNuIgs3YofrxLiuV7448HJFjJ09yH48V9eyA7ztDFZRSEn7nQ9a_O7CKAqXvrPZMdXLYF4kDU_zF9fEIk_NR6ZufkBhNCGOhwZR4_BEAMgWPOP0GLYCw4cUOFpwIqJVyIBXHS6e2UQxY1SyxWqVcXkVU777qXzLQq5EKhFRgT-rCDt1yMB1edLRci/https%3A%2F%2Ftwitter.com%2Fs_kariotis >> >>>> > >> >>>> >> >> LinkedIn: >> >>>> >> http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> >> >>>> >> >> [[alternative HTML version deleted]] >> >>>> >> >> >> >>>> >> >> _______________________________________________ >> >>>> >> >> Bioc-devel@r-project.org mailing list >> >>>> >> >> >> >>>> >> https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> >>>> >> >> >> >>>> >> > >> >>>> >> >> >>>> >> -- >> >>>> >> Cheers, >> >>>> >> Sokratis Kariotis >> >>>> >> PhD Student >> >>>> >> University of Sheffield, Medical School >> >>>> >> MedTech < >> >>>> >> https://secure-web.cisco.com/1UZJHpVQsI8BfFPWhbq-J2rDlzAewQvgrzEc9WGdF_0K0yiBiLf-It8lbnJnE8RsNZOScd3XkvYSJDp2BZEA9qQ9SiKToJsRHBxjK2bfZLmwCkERBcmUFd9SdoMoB1G4RpEYZFB-1xVSxAPfdiIt_Y4pwfTBtitLHh35siIHmmWTxxGRMgWsScGr5LH7uzLXpK2aU1CTuzOreG-QdW1lDSHVyqJ3QZFGcdCaZ8o8f2qfBdk3hp6oJ7YYYPkFS_RJhwUgAJLPzKq_WYmrO-LvFJowXv0kL7-wJl2HP9iF0xxNvcUL0efR4AUskq7ASlnDR/https%3A%2F%2Fwww.facebook.com%2Fmedtechsheffield%2F >> >>>> >President >> >>>> >> Twitter: @s_kariotis < >> >>>> >> https://secure-web.cisco.com/1wN6YWZ6TrhzA9-XXGwx2WH2adnYr6vcYZGm8DxTnJrVaf7YW-KRmE5ab_OSDfDVhgUW8-M1VUejquNFC3yAsUPME7S2r9j6tBNjLXFYXx8J9c7lM4zLP2wNEVZHJygxBPw07YN2qNuIgs3YofrxLiuV7448HJFjJ09yH48V9eyA7ztDFZRSEn7nQ9a_O7CKAqXvrPZMdXLYF4kDU_zF9fEIk_NR6ZufkBhNCGOhwZR4_BEAMgWPOP0GLYCw4cUOFpwIqJVyIBXHS6e2UQxY1SyxWqVcXkVU777qXzLQq5EKhFRgT-rCDt1yMB1edLRci/https%3A%2F%2Ftwitter.com%2Fs_kariotis >> >>>> > >> >>>> >> LinkedIn: >> >>>> >> http://secure-web.cisco.com/1nI19pW3ICZ1hk_IVzt7VlU1NDTaT8xDl7lxbbA0_pcu6Krot_h7i4pFmb7XK6HU91_jSzusYJ17TVrz8IKViTCDf7Pi9ghcYil0SE-r4kPMOw69K_lwjejNNpFxoC9zsWBnVOJtmWXbe-_O6T8I7wB3MbwearMr_myd9D3fGhuTnVuFteHLDyYe60b2DE4do9HARpQEdL_K6U--3f0ipONofYwTtfiEphi9VJ2IQ8BE9r6Rref9m_jtc3_ZdSVcOzWNSt3qSQRXtWE-o6A63kf0a92EmMG8h7ERpZChslXjk-6ZWT2sMcsWzi5Odotr_/http%3A%2F%2Fwww.linkedin.com%2Fin%2Fsokratiskariotis >> >>>> >> >> >>>> >> [[alternative HTML version deleted]] >> >>>> >> >> >>>> >> _______________________________________________ >> >>>> >> Bioc-devel@r-project.org mailing list >> >>>> >> >> >>>> >> https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> >>>> >> >> >>>> > >> >>>> >> >>>> [[alternative HTML version deleted]] >> >>>> >> >>>> _______________________________________________ >> >>>> Bioc-devel@r-project.org mailing list >> >>>> >> >>>> >> https://secure-web.cisco.com/1omxEHTcWtl70OI-olS1ZqcaCRnJ4Fn7rAOZql6D3Es1hQNXpincALWN16-MMRS_hcYMa7XUNWNQCDWa-yJRM9Or1QqEitc7eAog1lECwY8yt_AjStJOHx8TUjutJBmCBaHIs1nbvB72Xyq14CUD4hILYXxa5J9qaf6apAoHsaFb_le9kNegFnRdgd_7WnA4h4cLPzFKSGX8j_U9d9oi2YM_-o-LEuaPDyIoQFXJIlocCu-LFEdEXKtbxWR6MoieJHYi6HiiP8-P2z9lq9gzD1ouLSRo2a727ohZSf1SFNkG-fj_b-K2Sas8AxSr_eh2z/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel >> >>>> >> >>>> >> >>>> This email message may contain legally privileged and/or confidential >> >>>> information. If you are not the intended recipient(s), or the >> employee or >> >>>> agent responsible for the delivery of this message to the intended >> >>>> recipient(s), you are hereby notified that any disclosure, copying, >> >>>> distribution, or use of this email message is prohibited. If you have >> >>>> received this message in error, please notify the sender immediately >> by >> >>>> e-mail and delete this email message from your computer. Thank you. >> >>>> >> >>> >> >>> >> >>> -- >> >>> Cheers, >> >>> Sokratis Kariotis >> >>> PhD Student >> >>> University of Sheffield, Medical School >> >>> MedTech <https://www.facebook.com/medtechsheffield/>President >> >>> Twitter: @s_kariotis <https://twitter.com/s_kariotis> >> >>> LinkedIn: http://www.linkedin.com/in/sokratiskariotis >> >>> >> >> >> >> >> >> -- >> >> Cheers, >> >> Sokratis Kariotis >> >> PhD Student >> >> University of Sheffield, Medical School >> >> MedTech <https://www.facebook.com/medtechsheffield/>President >> >> Twitter: @s_kariotis <https://twitter.com/s_kariotis> >> >> LinkedIn: http://www.linkedin.com/in/sokratiskariotis >> >> >> > >> >> -- >> Cheers, >> Sokratis Kariotis >> PhD Student >> University of Sheffield, Medical School >> MedTech <https://www.facebook.com/medtechsheffield/>President >> Twitter: @s_kariotis <https://twitter.com/s_kariotis> >> LinkedIn: http://www.linkedin.com/in/sokratiskariotis >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > -- Cheers, Sokratis Kariotis PhD Student University of Sheffield, Medical School MedTech <https://www.facebook.com/medtechsheffield/>President Twitter: @s_kariotis <https://twitter.com/s_kariotis> LinkedIn: http://www.linkedin.com/in/sokratiskariotis [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
