Hi Herve,
I reinstalled AnnotationDbi 1.25.17, and now things work flawlessly.
Thank you for your help!
Michael
On 09.04.2014 19:25, Hervé Pagès wrote:
Hi Michael,
Because of a recent change to IRanges, some information about the
as.list method table is now out-of-sync in your installed
Dear Bioc gurus,
Since a few days, QuasR devel (1.3.13 and 1.3.14) is failing on some
unit tests, which turns out to be reproducible independent of QuasR and
might be related to R getting the wrong method for [[-.
The following works fine...
library(GenomicRanges)
grl -
i can't confirm this
library(GenomicRanges)
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport,
Hi Michael,
Because of a recent change to IRanges, some information about the
as.list method table is now out-of-sync in your installed
AnnotationDbi (granted it was installed before the new IRanges
propagated to you). Re-installing AnnotationDbi should clear this.
I bumped AnnotationDbi
