Re: [Bioc-devel] Bioconductor package landing pages

2017-09-12 Thread Nima Hejazi
Hi Hervé --- Thanks for pointing out all of the information available on the builds to me. Based on the information you point out, I think I've been able to add the required data set to the biotmleData package by bumping the versions on the RELEASE_3_5 and master branches appropriately (and made

Re: [Bioc-devel] Bioconductor package landing pages

2017-09-11 Thread Hervé Pagès
Hi Nima, The build machines are NOT trying to use version 1.0.0 of the biotmleData package. They are using the version that is currently publicly available here: https://bioconductor.org/packages/3.6/data/experiment/html/biotmleData.html It's version 1.1.0. The build machines installed it

Re: [Bioc-devel] Bioconductor package landing pages

2017-09-10 Thread Nima Hejazi
Hi Hervé, Thanks for your note. I do indeed believe that the error was initially due to the build trying to use an older version of the data package biotmleData (1.0.0, as you stated). After the update of biotmleData (to 1.1.0; aside: I realize this is rather bad practice, but I don't intend to

Re: [Bioc-devel] Bioconductor package landing pages

2017-09-06 Thread Hervé Pagès
Hi Nima, Normally you have to allow 24 hours or so to see your changes show up on the build report: https://bioconductor.org/checkResults/3.5/data-experiment-LATEST/ and on the package landing page: https://bioconductor.org/packages/3.5/data/experiment/html/biotmleData.html But sometimes

Re: [Bioc-devel] Bioconductor package landing pages

2017-09-05 Thread Nima Hejazi
Hi Nitesh -- Thanks very much for the help on this last week. I've been investigating the build problem displayed on the page you linked rather slowly but have reached a point where I now have a question: - The error appears to be due to an example data set not being found. This data set

Re: [Bioc-devel] Bioconductor package landing pages

2017-08-28 Thread Turaga, Nitesh
Hi Nima, Please check http://bioconductor.org/checkResults/3.6/bioc-LATEST/biotmle/malbec1-buildsrc.html, it shows that the page was generated on Sunday. There is also a snapshot date when your repo was captured by the nightly build, and even the last commit. But this issue, is because your

[Bioc-devel] Bioconductor package landing pages

2017-08-28 Thread Nima Hejazi
Hello All --- After the relatively recent migration from SVN to git, I've followed the various guidelines for linking the GitHub repo of my package biotmle to the Bioconductor git server, I've pushed several important updates to the Bioc master branch. My