[Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

2015-11-09 Thread Rainer Johannes
Dear All, dear Florian, I’m currently working on a Gviz-hack that would enable to use the FaFiles provided from AnnotationHub directly as SequenceTracks in Gviz. I think that might be a nice addition, since that way both Ensembl based annotations (e.g. as EnsDbs) and Ensembl genome fasta files

Re: [Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

2015-11-09 Thread Rainer Johannes
# my amazing changes >svn diff > Gviz.diff # ... as a diff for Florian > > > From: Bioc-devel [bioc-devel-boun...@r-project.org] on behalf of Rainer > Johannes [johannes.rai...@eurac.edu] > Sent: Monday, November 09, 2015 10:08 AM > T

Re: [Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

2015-11-09 Thread Hahne, Florian
Wow, you are busy :-) I will just wait until I receive all of you patches before adding them to the official package release. Florian On 09/11/15 16:08, "Bioc-devel on behalf of Rainer Johannes" wrote: >Dear All, dear

Re: [Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

2015-11-09 Thread Morgan, Martin
-project.org] on behalf of Rainer Johannes [johannes.rai...@eurac.edu] Sent: Monday, November 09, 2015 10:08 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub Dear All, dear Florian, I’m currently working on a Gviz-hack that would en

Re: [Bioc-devel] Gviz: implementing support for FaFiles from AnnotationHub

2015-11-09 Thread Rainer Johannes
well yes, I just need this stuff, thus I’m implementing it :) Shouldn’t take too long until you get some files (have to add some info to the documentation and to the vignette). cheers, jo > On 09 Nov 2015, at 16:11, Hahne, Florian wrote: > > Wow, you are busy :-)