Re: [Bioc-devel] IFAA Bioconductor

2024-01-18 Thread Zhigang Li
Morgan > > > > *From: *Bioc-devel on behalf of > Zuguang Gu > *Date: *Tuesday, January 16, 2024 at 11:49 AM > *To: *Zhigang Li > *Cc: *bioc-devel@r-project.org > *Subject: *Re: [Bioc-devel] IFAA Bioconductor > > I saw MatrixExtra defines several S4 methods/di

Re: [Bioc-devel] IFAA Bioconductor

2024-01-16 Thread Martin Morgan
also need to make a change for tcrossprod…) Martin Morgan From: Bioc-devel on behalf of Zuguang Gu Date: Tuesday, January 16, 2024 at 11:49 AM To: Zhigang Li Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] IFAA Bioconductor I saw MatrixExtra defines several S4 methods/dispatches

Re: [Bioc-devel] IFAA Bioconductor

2024-01-16 Thread Zuguang Gu
I saw MatrixExtra defines several S4 methods/dispatches for the generic `crossprod()` which is actually defined in base. Maybe you can import the whole MatrixExtra namespace? import(MatrixExtra) On Tue, 16 Jan 2024 at 16:14, Zhigang Li wrote: > Hi There, > > It seems that the error says : >

Re: [Bioc-devel] IFAA Bioconductor

2024-01-16 Thread Ramos Perez, Marcel via Bioc-devel
Hi Zhigang, AFAICT, I don't see `crossprod` as an exported symbol in `MatrixExtra`. > library(MatrixExtra) > ls("package:MatrixExtra") Did you mean Matrix:: or base:: crossprod? Best regards, Marcel On 1/16/24 10:14 AM, Zhigang Li wrote: Hi There, It seems that the error says : " **

Re: [Bioc-devel] IFAA Bioconductor

2024-01-16 Thread Zhigang Li
Hi There, It seems that the error says : " ** byte-compile and prepare package for lazy loading Error: object ‘crossprod’ is not exported by 'namespace:MatrixExtra' " But we checked and the package "MatrixExtra" still has the function "crossprod". And in the NAMESPACE file, there is a row for