Re: [Bioc-devel] RCurl on Windows

2020-11-23 Thread Vincent Carey
Curious situation, that we can hope will be resolved with action at CRAN. FWIW RCurl for windows is building/checking without incident: https://cran.r-project.org/bin/windows/contrib/checkSummaryWin.html The UniProt.ws check failure on malbec2 etc. seems unrelated, the URL noted in the failure

Re: [Bioc-devel] RCurl on Windows

2020-11-23 Thread James W. MacDonald
It's not something I need, per se, but what other packages that depend on RCurl need. This issue was brought to my attention because someone on the support site had a problem with the UniProt.ws package, which uses RCurl to download data. Given the reverse dependency tree for RCurl I assume this

Re: [Bioc-devel] RCurl on Windows

2020-11-23 Thread Vincent Carey
I reproduced the problem you noted. Rebuilding RCurl with (an updated?) openssl for windows is not a slam-dunk for me at the moment. Can the curl package do what you need? On Mon, Nov 23, 2020 at 11:49 AM James W. MacDonald wrote: > FYI, there appears to be a problem with RCurl on Windows,

Re: [Bioc-devel] RCurl on Windows

2020-11-23 Thread Vincent Carey
RCurl was originally an omeghat offering by Duncan Temple Lang. I have a windows machine here and will have a look. On Mon, Nov 23, 2020 at 11:49 AM James W. MacDonald wrote: > FYI, there appears to be a problem with RCurl on Windows, most likely due > to building against an old version of

[Bioc-devel] RCurl on Windows

2020-11-23 Thread James W. MacDonald
FYI, there appears to be a problem with RCurl on Windows, most likely due to building against an old version of OpenSSL. Or at least that's what Google tells me. Anyway, reproducible code: > library(RCurl) > url <- "www.uniprot.org/mapping" > params <- c(from = "ACC+ID", to = "PDB_ID", format =