Re: [Bioc-devel] Rhtslib-linked package not compiling on Windows

2020-01-26 Thread Lucas Nell
Hello Herve, Thank you so much for your help! The package I'm developing is actually on CRAN, but using the new Rtools40 with gcc 8.0 seems to work. For a testing environment on Windows, win-builder has a version that uses Rtools40. Cheers, Lucas

Re: [Bioc-devel] Rhtslib-linked package not compiling on Windows

2020-01-21 Thread Pages, Herve
Hi Lucas, In order to compile an Rhtslib client package on Windows you need a setup that mimics closely what we have on our Windows builders. In particular you need to install a bunch of external libraries in C:\extsoft and edit R\etc\i386\Makeconf and R\etc\x64\Makeconf to let R know about

[Bioc-devel] Rhtslib-linked package not compiling on Windows

2020-01-20 Thread Lucas Nell
Hello, I'm having trouble linking to Rhtslib on Windows, specifically with finding some of the required linked libraries (libcurl, among others). I made a simple R package with only one function that compresses a file using BGZF (link here ). After