Re: [Bioc-devel] Unable to reproduce chimeraviz 3.10 build failure

2019-10-18 Thread Shepherd, Lori
Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Unable to reproduce chimeraviz 3.10 build failure Thank you for the help. I'm still unable to reproduce the error. I'm working from the docker image bioconductor/devel_core2 (the latest version at the time of writing). Opening the R sessi

Re: [Bioc-devel] Unable to reproduce chimeraviz 3.10 build failure

2019-10-17 Thread Stian Lågstad
Thank you for the help. I'm still unable to reproduce the error. I'm working from the docker image bioconductor/devel_core2 (the latest version at the time of writing). Opening the R session I see this: ``` R version 3.6.1 (2019-07-05) -- "Action of the Toes" Copyright (C) 2019 The R Foundation

Re: [Bioc-devel] Unable to reproduce chimeraviz 3.10 build failure

2019-10-02 Thread Pages, Herve
Hi Stian, The 3.10 builds use BioC 3.10 which is the current **devel** version of BioC so make sure you also use this if you want to reproduce a 3.10 build failure. Here is how to quickly reproduce the error: library(chimeraviz) defuse833ke <- system.file( "extdata",

[Bioc-devel] Unable to reproduce chimeraviz 3.10 build failure

2019-10-02 Thread Stian Lågstad
Hi, The most recent build of chimeraviz fails when rebuilding the vignette: https://bioconductor.org/checkResults/3.10/bioc-LATEST/chimeraviz/malbec1-buildsrc.html, and I'm unable to reproduce this locally. Does anyone have ideas as to how I can dig deeper into this? Thank you. Here's an