Re: [Bioc-devel] Updating information on Bioconductor site
If the build report shows the right version, and the page doesn't appear to be updated (make sure you are checking development page), try a hard refresh on the page to make sure browser isn't using a cached version (I think it is Ctrl+shift+F5 on chrome). Robert On Sat, Sep 15, 2018, 1:05 PM John Gagnon wrote: > Thanks, I used the link you provided to the build report and it seems that > the information did push through. > > Best, > John > > > On Sep 15, 2018, at 9:38 AM, Martin Morgan > wrote: > > > > > > > > On 09/15/2018 12:34 PM, Levi Waldron wrote: > >> John, is your new version number reflected on the devel version of the > >> package landing page and the build report? After you push a new version > >> number to master, it will propagate the next day after overnight > >> building/testing. > >> AFAIK, there are only a few explanations for why git pushes do not show > up > >> on the package landing page (have I missed any?): > >> 1. You didn't actually push to the relevant branch at > git.bioconductor.org > >> (e.g. you pushed to GitHub only, or pushed to master but checked the > >> release landing page) > >> 2. You didn't bump the version number > >> 3. There was an error in the package build > > > > maybe useful to remember that the build report is at > > > > http://bioconductor.org/checkResults/devel/bioc-LATEST/plotGrouper/ > > > > (replace 'devel' with 'release' for the release branch). > > > > Martin > > > > > >> 4. You haven't waited until the next day for software packages, or for > the > >> twice a week builds of experimental data packages > >> 5. Occasionally, there is a problem with the build systems that affects > >> many packages > >> [[alternative HTML version deleted]] > >> ___ > >> Bioc-devel@r-project.org mailing list > >> https://stat.ethz.ch/mailman/listinfo/bioc-devel > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Updating information on Bioconductor site
Thanks, I used the link you provided to the build report and it seems that the information did push through. Best, John > On Sep 15, 2018, at 9:38 AM, Martin Morgan wrote: > > > > On 09/15/2018 12:34 PM, Levi Waldron wrote: >> John, is your new version number reflected on the devel version of the >> package landing page and the build report? After you push a new version >> number to master, it will propagate the next day after overnight >> building/testing. >> AFAIK, there are only a few explanations for why git pushes do not show up >> on the package landing page (have I missed any?): >> 1. You didn't actually push to the relevant branch at git.bioconductor.org >> (e.g. you pushed to GitHub only, or pushed to master but checked the >> release landing page) >> 2. You didn't bump the version number >> 3. There was an error in the package build > > maybe useful to remember that the build report is at > > http://bioconductor.org/checkResults/devel/bioc-LATEST/plotGrouper/ > > (replace 'devel' with 'release' for the release branch). > > Martin > > >> 4. You haven't waited until the next day for software packages, or for the >> twice a week builds of experimental data packages >> 5. Occasionally, there is a problem with the build systems that affects >> many packages >> [[alternative HTML version deleted]] >> ___ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Updating information on Bioconductor site
On 09/15/2018 12:34 PM, Levi Waldron wrote: John, is your new version number reflected on the devel version of the package landing page and the build report? After you push a new version number to master, it will propagate the next day after overnight building/testing. AFAIK, there are only a few explanations for why git pushes do not show up on the package landing page (have I missed any?): 1. You didn't actually push to the relevant branch at git.bioconductor.org (e.g. you pushed to GitHub only, or pushed to master but checked the release landing page) 2. You didn't bump the version number 3. There was an error in the package build maybe useful to remember that the build report is at http://bioconductor.org/checkResults/devel/bioc-LATEST/plotGrouper/ (replace 'devel' with 'release' for the release branch). Martin 4. You haven't waited until the next day for software packages, or for the twice a week builds of experimental data packages 5. Occasionally, there is a problem with the build systems that affects many packages [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Updating information on Bioconductor site
John, is your new version number reflected on the devel version of the package landing page and the build report? After you push a new version number to master, it will propagate the next day after overnight building/testing. AFAIK, there are only a few explanations for why git pushes do not show up on the package landing page (have I missed any?): 1. You didn't actually push to the relevant branch at git.bioconductor.org (e.g. you pushed to GitHub only, or pushed to master but checked the release landing page) 2. You didn't bump the version number 3. There was an error in the package build 4. You haven't waited until the next day for software packages, or for the twice a week builds of experimental data packages 5. Occasionally, there is a problem with the build systems that affects many packages [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Updating information on Bioconductor site
Thanks, Robert, I have updated the files on master GitHub, merged with upstream/master and pushed to both but I have not seen the website change on Bioconductor in two days. Am I doing something wrong? I am following these instructions: https://bioconductor.org/developers/how-to/git/sync-existing-repositories/ Thanks for your help! John > On Sep 14, 2018, at 7:59 PM, Robert M. Flight wrote: > > John, > > I think that is all pulled directly from the corresponding sections in the > DESCRIPTION file. So you would have to modify the DESCRIPTION, version bump, > and push the changes up. > > After the next build, the changes should propagate to the website. > > Note that if you only do this on the master branch, I think the differences > will only appear for development version of the package. But next release > should be coming up in October some time, so that shouldn't be that big a > deal. > > Cheers, > > Robert > >> On Fri, Sep 14, 2018, 7:44 PM John Gagnon wrote: >> Hello, >> >> I was wondering how I can go about updating information on the Bioconductor >> package landing page. I would like to update the author, summary, and GitHub >> website address. >> >> Thanks! >> John >> ___ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] Updating information on Bioconductor site
John, I think that is all pulled directly from the corresponding sections in the DESCRIPTION file. So you would have to modify the DESCRIPTION, version bump, and push the changes up. After the next build, the changes should propagate to the website. Note that if you only do this on the master branch, I think the differences will only appear for development version of the package. But next release should be coming up in October some time, so that shouldn't be that big a deal. Cheers, Robert On Fri, Sep 14, 2018, 7:44 PM John Gagnon wrote: > Hello, > > I was wondering how I can go about updating information on the > Bioconductor package landing page. I would like to update the author, > summary, and GitHub website address. > > Thanks! > John > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] Updating information on Bioconductor site
Hello, I was wondering how I can go about updating information on the Bioconductor package landing page. I would like to update the author, summary, and GitHub website address. Thanks! John ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
