Dear Julie
Thank you for your question. It would however be more appropriate for
the support forum, not for the developer mailing list. Would you mind
moving it there, perhaps also the responses so far?
There is no "in-principle" reason why DESeq2 shouldn't produce useful
results also for
Hi Cardin,
this package does not do the same as DESeq2,
http://bioconductor.org/packages/3.7/bioc/vignettes/transcriptogramer/inst/doc/transcriptogramer.html,
but you can use it to do a differential expression for proteins (case x
control).
2018-01-06 14:45 GMT-03:00 Cardin Julie via Bioc-devel <
Hi,
I have experienced very good results with DESeq2 for my RNASeq analysis. As
far as I understand, it is a tool that normalise our data from sequencing to
make them comparable.
I have a new project implicating proteins counts.
I have couple of data sets. For each sample we have:
rows with
