edgeR knows about LargeDataObject. It's your package that doesn't.
Gordon
On Fri, 27 Jun 2014, Dario Strbenac wrote:
Hello,
I never explicitly use that class in my function. I did debugging and realised
what the problem is. DGEList is part of class hierarchy and it inherits from
the
Hello,
My package doesn't ever explicitly call LargeDataObject, so I don't think it
should have to explicitly import it.
I am also confused by the advice that Depends is preferable to Imports. I read
in Writing R Extensions that Packages whose namespace only is needed to load
the package
Hi Dario,
Isn't an easier fix to simply add
ImportFrom(limma, loessFit)
in your NAMESPACE file?
Best,
Jim
On 6/26/2014 12:00 AM, Dario Strbenac wrote:
Hello,
I am writing a package that has a function that uses
estimateGLMRobustDisp, leading to an error :
Error in dispBinTrend(y,
Date: Thu, 26 Jun 2014 04:00:11 +
From: Dario Strbenac dstr7...@uni.sydney.edu.au
To: bioc-devel@r-project.org bioc-devel@r-project.org
Subject: [Bioc-devel] edgeR estimateGLMRobustDisp Fails when Called
From A Package
Hello,
I am writing a package that has a function that uses
