Hi Michael,


The Github webhook is only for you to submit your latest push to the build 
system during the package submission process. I don't think you will need this 
after, because once your package gets accepted there will be a nightly package 
build. So whatever you commit will get built from our new git server.

It will not be possible to configure the webhook after transition (once your 
package is accepted, before that it remains the same).

You can choose to sync, but we highly recommend that you sync both your Github 
repo, and the RITAN bioconductor git repo. We have made this process easier 
now. As you pointed out there is documentation for this in the docs/scenario-2 
or docs/scenario-9.

There are ways to push to both Github and Bioconductor remotes in one command. 
You'd have to configure your git urls. (Check out your `git config --list`)

Best,

Nitesh

________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Zimmermann, 
Michael T., Ph.D. <zimmermann.mich...@mayo.edu>
Sent: Monday, July 24, 2017 11:56 PM
To: bioc-devel@r-project.org
Subject: [Bioc-devel] git clarifications

Dear BioC Devs,

As of release 3.5 I have a package in BioC, originating from 
github.com/MTZimmer/RITAN. During package submission, the webhook process from 
github into bioc was smooth. At this point, my commits to github no longer 
propagate into bioc. After the bioc transition to git, will a similar webhook 
system to the devel branch be possible? Being able to commit to github and 
automatically push/mirror to the development branch would be convenient.

As is, the recommended procedures 
(http://bioconductor.org/developers/how-to/git-mirrors/) seem indirect to me. 
Is it, or will it be, possible to configure the webhook to point to the devel 
version on bioc after the transition? From the bioc_git_transition docs 
(https://github.com/Bioconductor/bioc_git_transition/tree/master/doc) it looks 
like the plan is for us to sync as we choose - correct?

Finally, is there anything "official" to be done to start using the bioc git 
beta?

Your help in clarifying this process is appreciated.

Sincerely,

Michael T. Zimmermann
Ph. D. in Bioinformatics | Health Sciences Research | Division of Biomedical 
Statistics and Informatics
Mayo Clinic | 200 First Street SW | Rochester, MN 55905 | 
mayoclinic.org<http://www.mayoclinic.org>


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