Re: [Bioc-devel] glitches with releaseName() and seqlevelsStyle()

2020-09-18 Thread Pages, Herve
oops, sorry for letting this slip off my radar. see below... On 9/3/20 05:22, Robert Castelo wrote: > Hi Hervé, > > On 02/09/2020 21:44, Pages, Herve wrote: >> Hi Robert, >> >> >> >> On 9/2/20 11:12, Robert Castelo wrote: >>> hi, >>> >>> i've found the following glitches with 'releaseName()'

Re: [Bioc-devel] glitches with releaseName() and seqlevelsStyle()

2020-09-03 Thread Robert Castelo
Hi Hervé, On 02/09/2020 21:44, Pages, Herve wrote: Hi Robert, On 9/2/20 11:12, Robert Castelo wrote: hi, i've found the following glitches with 'releaseName()' and 'seqlevelsStyle()', i guess due to recent changes in BSgenome and GenomeInfoDb, which is why i'm cc'ing Hervé ;)

Re: [Bioc-devel] glitches with releaseName() and seqlevelsStyle()

2020-09-02 Thread Pages, Herve
Hi Robert, On 9/2/20 11:12, Robert Castelo wrote: > hi, > > i've found the following glitches with 'releaseName()' and > 'seqlevelsStyle()', i guess due to recent changes in BSgenome and > GenomeInfoDb, which is why i'm cc'ing Hervé ;) > > ===BioC release 3.11 everything

[Bioc-devel] glitches with releaseName() and seqlevelsStyle()

2020-09-02 Thread Robert Castelo
hi, i've found the following glitches with 'releaseName()' and 'seqlevelsStyle()', i guess due to recent changes in BSgenome and GenomeInfoDb, which is why i'm cc'ing Hervé ;) ===BioC release 3.11 everything OK= library(BSgenome.Hsapiens.UCSC.hg19)