Re: [Bioc-devel] not all bioc packages visible on github?

2018-01-25 Thread Mike Smith
git.bioconductor.org is the canonical source for all Bioconductor packages. Every Bioconductor package can be cloned from there, with a master branch representing Bioc-devel and separate named branches for all previous releases. However, it has no real visual interface, and I treat it in a

Re: [Bioc-devel] not all bioc packages visible on github?

2018-01-24 Thread Robert M. Flight
Paul, My understanding was that the Bioconductor github repos were going to die, and it was up to the maintainer where the source was, and a public source need not be available. I asked about this previously, and there was too much confusion between the official Bioconductor repos and developers

[Bioc-devel] not all bioc packages visible on github?

2018-01-24 Thread Paul Shannon
By example: https://github.com/Bioconductor/KEGGREST-> github project homepage displays https://github.com/Bioconductor/BrowserViz -> 404 Yet this works fine: git clone g...@git.bioconductor.org:packages/BrowserViz.git Is visibility at github.com/Bioconductor therefore conditional?