[Bioc-devel] Unable to push to origin master

2018-04-16 Thread Giorgio Melloni
Dear Bioc-Devel, I’ve just updated my package for the upcoming release upstream successfully using "git push upstream master”. My current remotes are set to: origin https://github.com/gmelloni/LowMACA.git (fetch) origin https://github.com/gmelloni/LowMACA.git (push) upstreamg...@git.bi

Re: [Bioc-devel] Unable to push to origin master

2018-04-23 Thread Giorgio Melloni
otes are set up correct. > > Best, > > Nitesh > > >> On Apr 16, 2018, at 2:10 PM, Giorgio Melloni >> wrote: >> >> Dear Bioc-Devel, >> >> I’ve just updated my package for the upcoming release upstream successfully >> using &quo

[Bioc-devel] resetting git.bioconductor password

2019-12-31 Thread Giorgio Melloni
Dear Bioc-devel, I want to reset both support.bioconductor and git.bioconductor password and I could easily do the first but I don’t receive any email from the second. Even after posting on support, I can’t see any email in inbox, spam or any other folder. Any suggestions? Thanks, — Giorgio

[Bioc-devel] timeout on perceval server macos snow leopard

2015-09-04 Thread Giorgio Melloni
I recently enhanced my package LowMACA on Bioconductor and I finally obtained the OK on build and check from linux and windows. On MacOS, the build get stuck at some point of the vignette during building but I don't know how to spot what is the function that is taking so long. Here is the resu

Re: [Bioc-devel] timeout on perceval server macos snow leopard

2015-09-08 Thread Giorgio Melloni
; BiocParallel does not manage the number of cores used so you need to be > careful of nesting layers too deep. The best approach is to expose > BPPARAM to the user so they can manage resources. By 'expose' I mean > allow the argument to be passed to the function and used in bplappl

[Bioc-devel] can't find an annotation package

2016-04-28 Thread Giorgio Melloni
Dear all, I was doing some debugging on a package submitted a year ago (LowMACA) that is accompanied by an annotation package (LowMACAAnnotation). I am able to svn checkout LowMACA here: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/LowMACA , but I cannot find a way to checkout th