n> git push upstream
FATAL: W any packages/variancePartition gabrielhoffman DENIED by fallthru
(or you mis-spelled the reponame)
fatal: Could not read from remote repository.
Please make sure you have the correct access rights
and the repository exists.
> ssh -T g...@git.bioconductor.org
Hi,
I am having an issue pushing changes from my git repo to Bioconductor. I can
push changes to Github just fine.
Here my push command fails.
> git push upstream
FATAL: W any packages/variancePartition gabrielhoffman DENIED by fallthru
(or you mis-spelled the reponame)
fatal: Could not
Hi,
I am getting a dependency error in the development branch of my package
variancePartition when Bioconductor builds my package.
ERROR: dependencies 'pbkrtest', 'lme4' are not available for package
'variancePartition'
These are standard enough dependencies, especially lme4. There is no
I am the developer of the variancePartition package, and I recently made some
very small changes to the documentation of my package. The latest version
1.10.3 builds correctly on Bioconductor's Windows and OS X machines but fails
on Ubuntu:
withr_2.1.2
>
> [88] mgcv_1.8-24 survival_2.42-6 RCurl_1.95-4.11
>
> [91] nnet_7.3-12 tibble_1.4.2 crayon_1.3.4
>
> [94] KernSmooth_2.23-15 rmarkdown_1.10 viridis_0.5.1
>
> [97] locfit_1.5-9.1
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
Due to a known issue
(https://github.com/lme4/lme4/issues/775#issuecomment-2024392388) running
lme4::lmer() fails in BioC 3.19 using R 4.4 2024-03-18 r86148 on the build site
because of a discrepancy between the Matrix version and the version used when
lme4 is compiled.
The solution is to
