Hi Aaron,
As Johannes said, your have to fix the repo yourself.
Your duplicate commits are non-contiguous which is surprising. It’s almost as
if the commit dates were changed somehow.
Once you fix the repo on Github, please send me the link and I can force push
to Bioconductor.
Best,
Nites
Thanks, Nitesh. I’ve already gone through the process of fixing the duplicate
commits and force pushed the cleaned history to GitHub
(https://github.com/aaronwolen/mimager).
No idea why the duplicates appeared out of order but I did verify the
dates/times were unchanged by comparing to a backup
Thanks for the information, Jo. Sounds like a very similar issue—even down to
the potentially faulty git-svn setup. Glad to hear Nitesh was able to copy over
your cleaned history to Bioconductor. Hopefully we can do the same for mimamger.
On Mar 7, 2018, 1:26 AM -0500, Rainer Johannes ,
wrote:
I recently had a similar problem with my FamAgg and ensembldb packages. I had
to remove the duplicated commits with `git rebase -i ` (i.e. interactive rebasing). During/after that I had to
fix some merge conflicts and ended overwriting my github master with the
cleaned history (`git push -f orig
Thanks, Nitesh, There are about 20 dupes. Here are a few examples:
- 2c01b08 and c0f7ed1
- 77a5d90 and 464edd9
- b952032 and 9abf5dd
On Mar 6, 2018, 1:27 PM -0500, Turaga, Nitesh ,
wrote:
> Hi Aaron,
>
> You cannot force push to the Bioconductor server as it is prevented by a
> pre-receive hook
Hi Aaron,
You cannot force push to the Bioconductor server as it is prevented by a
pre-receive hook on our end.
There are no duplicate commits on the Bioconductor version of the package right
now. Can you point the commits which are duplicated on a fresh clone of the
mimager package from git.b
Hi all,
I attempted syncing my existing GitHub repo for the mimager package with
git.bioconductor.org and was left with many duplicate commits, as documented.
Hoping to keep my history intact, I performed a rebase to clean-up the dupes
(giving preference to commits with git-svn-ids) but can’t f
