Re: [Bioc-devel] biocLite and useDevel

2016-10-14 Thread Dan Tenenbaum
Probably related to:

https://stat.ethz.ch/pipermail/bioc-devel/2016-October/009897.html

Dan


- Original Message -
> From: "Kasper Daniel Hansen" 
> To: "bioc-devel" 
> Sent: Friday, October 14, 2016 9:07:34 AM
> Subject: [Bioc-devel] biocLite and useDevel

> This is unexpected, to me at least (below).  I source biocLite and set
> useDevel(TRUE) and it does not switch to current devel branch.  Perhaps
> this has to do with branches and stuff.  Breaks current Travis setup.
> Perhaps this is just a hiccup which will go away.
> 
> # R-3.3
> 
> R version 3.3.1 RC (2016-06-14 r70789) -- "Bug in Your Hair"
> Copyright (C) 2016 The R Foundation for Statistical Computing
> Platform: x86_64-apple-darwin15.5.0 (64-bit)
> 
> R is free software and comes with ABSOLUTELY NO WARRANTY.
> You are welcome to redistribute it under certain conditions.
> Type 'license()' or 'licence()' for distribution details.
> 
>  Natural language support but running in an English locale
> 
> R is a collaborative project with many contributors.
> Type 'contributors()' for more information and
> 'citation()' on how to cite R or R packages in publications.
> 
> Type 'demo()' for some demos, 'help()' for on-line help, or
> 'help.start()' for an HTML browser interface to help.
> Type 'q()' to quit R.
> 
>> source("http://www.bioconductor.org/biocLite.R";)
> Bioconductor version 3.3 (BiocInstaller 1.22.3), ?biocLite for help
>> useDevel(TRUE)
> Installing package into ‘/usr/local/R/R-3.3/lib/R/site-library’
> (as ‘lib’ is unspecified)
> Bioconductor version 3.3 (BiocInstaller 1.22.3), ?biocLite for help
> 'BiocInstaller' changed to version 1.22.3
> 
>   [[alternative HTML version deleted]]
> 
> ___
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

[Bioc-devel] biocLite and useDevel

2016-10-14 Thread Kasper Daniel Hansen
This is unexpected, to me at least (below).  I source biocLite and set
useDevel(TRUE) and it does not switch to current devel branch.  Perhaps
this has to do with branches and stuff.  Breaks current Travis setup.
Perhaps this is just a hiccup which will go away.

# R-3.3

R version 3.3.1 RC (2016-06-14 r70789) -- "Bug in Your Hair"
Copyright (C) 2016 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin15.5.0 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

  Natural language support but running in an English locale

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("http://www.bioconductor.org/biocLite.R";)
Bioconductor version 3.3 (BiocInstaller 1.22.3), ?biocLite for help
> useDevel(TRUE)
Installing package into ‘/usr/local/R/R-3.3/lib/R/site-library’
(as ‘lib’ is unspecified)
Bioconductor version 3.3 (BiocInstaller 1.22.3), ?biocLite for help
'BiocInstaller' changed to version 1.22.3

[[alternative HTML version deleted]]

___
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel