Re: [Bioc-devel] Missed deadline

Kenneth, I agree with Kasper. I generally like the approach of getting the software out there sooner rather than later. Especially if the paper you are talking about is a method paper about the software algorithm, rather than a result paper. In that case, getting it into a public, DOI'ed

Re: [Bioc-devel] Missed deadline

This is a subjective question. As a paper reviewer I like to see the package accepted. That increases trust. As a package reviewer I like some idea of what the package actually does, so a statement like "we implement X which is described in (XX, in preparation), is also irritating. Unless you're

Re: [Bioc-devel] Missed deadline

Hi Gabe & Levi, Here is my current plan: 1 - complete the requirements checklist ( http://www.bioconductor.org/developers/package-submission/) 2 - get feedback the in-house NGS team, and then from the rest of in-house bioinformatics (others who use R more may spot some issues) 3 - set up pull

Re: [Bioc-devel] Missed deadline

ONE more note that Gabe reminded me of! As soon as your package is accepted into bioc-devel, it will be accessible via https://bioconductor.org/packages/mypackage/. Once it enters the release branch, that URL will instead point to the release page. On Tue, Apr 3, 2018 at 11:56 AM, Gabe Becker

Re: [Bioc-devel] Missed deadline

Indeed, and to be a bit more explicit about Levi's point, you *can* publish your package to bioconductor any time after the deadline, it will simply go to the development repo for ~6 months, which, as he points out, may not be a bad thing if it's not ready yet. On Tue, Apr 3, 2018 at 8:06 AM,

Re: [Bioc-devel] Missed deadline

On Tue, Apr 3, 2018 at 5:32 AM, Kenneth Condon wrote: > Have I missed the deadline for the latest release? I have created a > package, that runs great but there are a number of errors still from R CMD > check that I am sorting out. > > This is my first R package so I'm not

Re: [Bioc-devel] Missed deadline

The deadline to submit new packages for this release was yesterday. You could still submit the package for review but there is no guarantee it will make it through the review process in time to be included as reviewers will focus on packages that made the deadline. The last day for the newly