Hi guys,
I have dev.open-bio.org cvs account. But I am not sure which module I should checkout.
Can you explain the following modules? thanks.
biodata/
biojava-acedb/
biojava-bsane/
biojava-corba/
biojava-ensembl/
biojava-exptl/
biojava-html/
biojava-lims/
biojava-live/
Hi -
More than 40 tutorials are now available on "biojava in anger"
http://bioconf.otago.ac.nz/biojava/.
New topics include locations, features and GUIs
Mark Schreiber PhD
Bioinformatics
AgResearch Invermay
PO Box 50034
Mosgiel
New Zealand
PH: +64 3 489 9175
FAX: +64 3 489 3739
===
Small correction to this: Strings can be larger than 64kB. Prior to
Java 1.3, if you tried to serialize (or to do anything resulting in
serialization to) a String larger than 64kB, this would result in a
java.io.UTFDataFormatException.
See http://java.sun.com/j2se/1.3/docs/guide/serialization/r
Has anyone managed to get JBuilder 7's cvs to grab biojava-live from the
anonymous cvs repository?
I spent a bit of time trying yesterday but was getting no-where.
These are the settings I tried:
New -> Pull project from CVS -> set up directory -> Pserver settings: server
= cvs.open-bio.org, us
Hi -
If you already have the SimpleGene features constructed these will
contain a Location object. However, I think you are saying how can I
find a subsequence in my Genomic sequence and locate the gene that way?
To rapidly find exact matches you can use the biojava
KnuthMorrisPrattSearch object
Hello! I am trying to convert pdb to XML. If you can help me I would be very pleased.
Thank you!
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Hi!
I am trying to build a small program for finding intergenic areas.
This I am planning to do by locating all mRNA's in a genome and
outputting all the areas inbetween. Biojava seems to be able to help
with most of my tasks. However, I have a few questions. From what I
have understood I can have
