[Biojava-l] Parsing Blast Results

2003-01-21 Thread Simon Foote
Is there an easy way to get the QueryID from the blast result one is parsing. There's no getQueryID method in SeqSimilaritySearchResult, so I'm guessing its hidden somewhere else if it exists. Thanks, Simon Foote -- Bioinformatics Programmer Institute for Biological Sciences National Research

Re: [Biojava-l] web service problems

2003-01-21 Thread Phillip Lord
> "Michael" == Michael L Heuer <[EMAIL PROTECTED]> writes: Michael> Just grasping at straws here, but is it possible that Michael> classes from biojava.jar and bj-ensembl.jar are being Michael> loaded by different classloaders within the servlet Michael> engines? Maybe try building a

Re: [Biojava-l] web service problems

2003-01-21 Thread Michael L. Heuer
Just grasping at straws here, but is it possible that classes from biojava.jar and bj-ensembl.jar are being loaded by different classloaders within the servlet engines? Maybe try building a single .war file from both projects. michael On Tue, 21 Jan 2003, Matthew Pocock wrote: > Hi, > > I'm

[Biojava-l] web service problems

2003-01-21 Thread Matthew Pocock
Hi, I'm having some problems with biojava in a web service I wrote. I'm using biojava.jar and bj-ensembl.jar along with my own jsp and servlets. It used to work (before xmas), but now I get an exception: "NoSuchFieldError: naturalOrder". This is a field in Location (in biojava.jar), and the ca