most certainly be detected
and compiled into native code by the Java Runtime on the fly. This might
make it hard to say if the java code would be much slower than the C code.
- Mark
Mark Fortner <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
12/16/2005 10:36 AM
Please respond to m.fo
a-l] Sequence Iteration in BioJava(x)
On Dec 15 2005, Mark Fortner wrote:
I think what you want is the SymbolListViews.orderNSymbolList method.
It will take a SymbolList and turn it into another where it
is viewed in
another compound alphabet of the required order.
I'm looking f
me to
iterate through a sequence this way, or am I on my
own?
Regards,
Mark Fortner
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I wonder if it would be worthwhile to have an alphabet like approach to
this, where the alphabets are actually field tokens/field names that are
either statically defined, or are defined in XML files? For example,
you might have entries like
You could save subsets of thes
The Perl and Python support might help people currently working on the
bioperl and biopython to incorporate biojava into their development plans.
You can find out more about it at http://www-124.ibm.com/developerworks/projects/bsf
Regards,
Mark Fortner
Matthew Pocock wrote:
[EMAIL PROTECTED]&qu
