Re: [Biojava-l] ComponentFeature.Template

2001-06-05 Thread Thomas Down
On Tue, Jun 05, 2001 at 01:12:14PM +0100, Dr S.M. Huen wrote: > Yes it is. > > But the reason I gained the impression that strand wasn't supported was > from this part of AssembledSymbolList.java:- > > public Symbol symbolAt(int pos) { > Location l = locationOfPoint(pos); > if (l

Re: [Biojava-l] ComponentFeature.Template

2001-06-05 Thread Dr S.M. Huen
On Tue, 5 Jun 2001, Thomas Down wrote: > On Mon, Jun 04, 2001 at 08:49:30PM +0100, Dr S.M. Huen wrote: > > >From what I can discern from the specs and the sources, the component and > > the sequence onto which it is mapped must be collinear (ie. same size > > and sense). Have I understood that c

Re: [Biojava-l] ComponentFeature.Template

2001-06-05 Thread Thomas Down
On Mon, Jun 04, 2001 at 08:49:30PM +0100, Dr S.M. Huen wrote: > >From what I can discern from the specs and the sources, the component and > the sequence onto which it is mapped must be collinear (ie. same size > and sense). Have I understood that correctly? The requirements are that both locati

[Biojava-l] ComponentFeature.Template

2001-06-04 Thread Dr S.M. Huen
>From what I can discern from the specs and the sources, the component and the sequence onto which it is mapped must be collinear (ie. same size and sense). Have I understood that correctly? I would like to propose an extension to allow the sequences to either be parallel or antiparallel. This