Re: [Biojava-l] Gapping Sequence problems

2005-12-21 Thread mark . schreiber
(bcc: Mark Schreiber/GP/Novartis) Subject: [Biojava-l] Gapping Sequence problems Hello all, I am hung up on SimpleGappedSymbolList problem. I want to add gaps to DNA sequences that are loaded in from file that contain gaps and remove the gaps. I just load the sequences into an instanc

RE: [Biojava-l] Gapping Sequence problems

2005-12-21 Thread Richard HOLLAND
. - > -Original Message- > From: [EMAIL PROTECTED] > [mailto:[EMAIL PROTECTED] On Behalf Of Dan Cardin > Sent: Wednesday, December 21, 2005 4:16 PM > To: biojava-l@biojava.org > Subject: [Biojava-l] Gapping Sequence problems > > >

[Biojava-l] Gapping Sequence problems

2005-12-21 Thread Dan Cardin
Hello all, I am hung up on SimpleGappedSymbolList problem. I want to add gaps to DNA sequences that are loaded in from file that contain gaps and remove the gaps. I just load the sequences into an instance of type Sequence. Here is snippet , private void finalizeAddGapEdit(){ SimpleGappedSymbol