RE: [Biojava-l] LocationTools

2001-09-23 Thread Mark Schreiber
from? > > Greg > > > -Original Message- > > From: Mark Schreiber [mailto:[EMAIL PROTECTED]] > > Sent: Thursday, September 20, 2001 6:26 PM > > To: [EMAIL PROTECTED] > > Subject: [Biojava-l] LocationTools > > > > > > Hi - > &

RE: [Biojava-l] LocationTools

2001-09-21 Thread Cox, Greg
working from? Greg > -Original Message- > From: Mark Schreiber [mailto:[EMAIL PROTECTED]] > Sent: Thursday, September 20, 2001 6:26 PM > To: [EMAIL PROTECTED] > Subject: [Biojava-l] LocationTools > > > Hi - > > A number of methods in LocationTools ar

Re: [Biojava-l] LocationTools

2001-09-21 Thread Thomas Down
On Fri, Sep 21, 2001 at 10:25:51AM +1200, Mark Schreiber wrote: > Hi - > > A number of methods in LocationTools are also present in the Location > classes. Are the Location methods likely to be deprecated in the near > future? Is there a reason for this redundancy? There were various bugs in the

[Biojava-l] LocationTools

2001-09-20 Thread Mark Schreiber
Hi - A number of methods in LocationTools are also present in the Location classes. Are the Location methods likely to be deprecated in the near future? Is there a reason for this redundancy? Mark ~~~ Mark Schreiber Ph

RE: [Biojava-l] LocationTools + Decoratorated Locations = ?

2001-06-10 Thread Schreiber, Mark
Mosgiel New Zealand PH: +64 3 489 9175 > -Original Message- > From: Cox, Greg [mailto:[EMAIL PROTECTED]] > Sent: Saturday, June 09, 2001 3:45 AM > To: 'Schreiber, Mark'; '[EMAIL PROTECTED]' > Subject: RE: [Biojava-l] LocationTools + Decoratorated L

RE: [Biojava-l] LocationTools + Decoratorated Locations = ?

2001-06-08 Thread Cox, Greg
ong enough to justify the headache of implementing this, is that accurate? Greg -Original Message- From: Schreiber, Mark [mailto:[EMAIL PROTECTED]] Sent: Thursday, June 07, 2001 7:47 PM To: 'Cox, Greg'; '[EMAIL PROTECTED]' Subject: RE: [Biojava-l] LocationTools + Dec

[Biojava-l] LocationTools + Decoratorated Locations = ?

2001-06-07 Thread Cox, Greg
I'm feeling masochistic and ready to tackle the issue of how the location semantics apply to decorated locations (currently circular and 'between' locations). Between locations: The problem: The standard BioJava location is defined to be a set of indices of bases, which may or may not b

RE: [Biojava-l] LocationTools + Decoratorated Locations = ?

2001-06-07 Thread Schreiber, Mark
> -Original Message- > From: Cox, Greg [mailto:[EMAIL PROTECTED]] > Sent: Friday, June 08, 2001 9:15 AM > To: '[EMAIL PROTECTED]' > Subject: [Biojava-l] LocationTools + Decoratorated Locations = ? > > > I'm feeling masochistic and ready to