Hello,
the exception I posted in the last mail had nothing to do with the
application server I use. It was an IDE specific bug: 'Java Studio
Creator Early Access 2' failed to execute the build.xml-file properly
when creating biojava.jar.
This was solved by using Netbeans to build the jar-file
Hi,
the problem is the security-policy of the container I use for my
web-application. In this case it's the 'Sun Java System Application
Server Platform Edition 8.1'. As Thomas Down suggested, the Server
prohibits the creation of ClassLoaders, however they are needed by BioJava.
So I tried to
Thomas Down wrote:
> Do you have an up-to-date bytecode.jar somewhere where it will be
> picked up ...
An off-topic but related question -- is the bytecode library used anywhere
other than in biojava proper? It might make things one step easier to
merge the bytecode package (back?) into the mai
Hi Thomas,
I use "Java Studio Creator2 EarlyAccess2" as IDE, which runs with Java
1.5 as platform.
Further I have an up-to-date bytecode.jar (it's in the cvs-library I
just installed a few days ago).
When I ran the application with the additional line you sent, I got
another exception. I hope
Hi Felix,
This doesn't look like a problem specific to GenbankSequenceDB
itself, but a problem with initialising some core BioJava machinary
(from the exception you report, it looks like the static initializer
for the FeatureFilter.OnlyChildren class is failing -- I assume the
real proble
Hello,
I used to download DNA-sequences from Genbank with the
'getSequence'-method from the class 'GenbankSequenceDB' (Biojava 1.4).
After I installed the latest cvs-version, it seems to be not working
anymore.
This is where I call the method:
public class GenbankDownload {
static priva
