Re: [Biojava-l] Programming hang while trying to do Profile HMM

2003-10-04 Thread Matthew Pocock
Hi @llan, There was a bug in the 1.3 release that made this code infinite-loop. It's fixed in the nightly builds. Has anybody ported the fixes to DP back to the 1.3 branch? Is it time to make a maintainance release? Matthew allanlee wrote: Hi, Good day! I am trying to follow the exmaple giv

[Biojava-l] Programming hang while trying to do Profile HMM

2003-10-03 Thread allanlee
Hi, Good day! I am trying to follow the exmaple given in http://www.biojava.org/docs/bj_in_anger/profileHMM.htm but when I tried to run it, it just hang there. It hang there when I call: DP dp = DPFactory.DEFAULT.createDP(hmm); --