Further to the idea of phred scores maybe a type of annotation where each annotation is assigned a quality. One particularly thorny issue in all of this is that quality information implies fuzziness. A fuzzy sequence can therefore produce more than one result when it is translated (unless a loss of information can be accepted), how do we deal with this?? perhaps a fuzzy sequence class is more whats required any thoughts? Mark Mark Schreiber Bioinformatics AgResearch Invermay PO Box 50034 Mosgiel New Zealand PH: +64 3 489 9175 _______________________________________________ Biojava-l mailing list - [EMAIL PROTECTED] http://biojava.org/mailman/listinfo/biojava-l
