Re: [Biojava-l] biojava and STRAP

2005-03-11 Thread Andreas Prlic
Hi Christoph! Further it has a very fast PDB and DSSP parsers (30ms per PDB-file). I contributed a PDB parser and data model to biojava - CVS a while ago. The parser mainly parses the coordinate section of the PDB files, so it would be nice to get the header section parsed as well. - though I

Re: [Biojava-l] biojava and STRAP

2005-03-10 Thread mark . schreiber
> >I would like to ask whether my program STRAP could benefit from >BioJava and vice versa. Is it worth to develop converters to exchange >objects like protein objects between both? > >http://www.charite.de/bioinf/strap/ > > >STRAP is a multi purpose multiple sequences alignment tool. It >contains

[Biojava-l] biojava and STRAP

2005-03-10 Thread Dr. Christoph Gille
Hi, I would like to ask whether my program STRAP could benefit from BioJava and vice versa. Is it worth to develop converters to exchange objects like protein objects between both? http://www.charite.de/bioinf/strap/ STRAP is a multi purpose multiple sequences alignment tool. It contains wrapp