Re: [Biojava-l] problem in format.writesequence for EmblLikeFormat

2002-07-17 Thread Matthew Pocock
You're a star Keith. This is one of our few recurrent classes of bug. Do we have regression tests for this (in embl, genbank and fasta) yet? Matthew Keith James wrote: >>" " == saerts <[EMAIL PROTECTED]> writes: > > > > Hello, There appears to be a problem when writing a sequence

Re: [Biojava-l] problem in format.writesequence for EmblLikeFormat

2002-07-17 Thread Keith James
> " " == saerts <[EMAIL PROTECTED]> writes: > Hello, There appears to be a problem when writing a sequence to > file in EMBL format, but only if it contains a multiple of 60 > nucleotides (there are 60 nt's on each line) -> the last line > of nucleotides is not written an

Re: [Biojava-l] problem in format.writesequence for EmblLikeFormat

2002-07-12 Thread Keith James
> " " == saerts <[EMAIL PROTECTED]> writes: > Hello, There appears to be a problem when writing a sequence to > file in EMBL format, but only if it contains a multiple of 60 > nucleotides (there are 60 nt's on each line) -> the last line > of nucleotides is not written an

[Biojava-l] problem in format.writesequence for EmblLikeFormat

2002-07-12 Thread saerts
Hello, There appears to be a problem when writing a sequence to file in EMBL format, but only if it contains a multiple of 60 nucleotides (there are 60 nt's on each line) -> the last line of nucleotides is not written and the nucleotide-count of the last line is incorrect. Example code and ex