>I just wanna note that if somebody writes it up for the cookbook, note
>that the code snippet by Mark isn't symmetric with transcribeToRNA().
>I put in a DNATools.complement() to make it just so.
Changing strand, alphabet and polarity all in one go wrecks my head.
___
Hi again,
On 8/15/05, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote:
> Surprisingly there is not a method ro reverseTranslation in RNATools, I
> might add one. It does however give a nice opportunity to see how biojava
> translates symbols from one Alphabet to another.
>
> [SNIP code]
Hey thanks f
hod does the opposite.
Anyone want to wirte that up for Biojava in Anger?
- Mark
Jacob Rohde <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
08/15/2005 04:26 PM
To: biojava-l@biojava.org
cc: (bcc: Mark Schreiber/GP/Novartis)
Subject: Re: [Biojava-l
Hi,
On 8/15/05, [EMAIL PROTECTED] <[EMAIL PROTECTED]> wrote:
> Take a look at http://www.biojava.org/docs/bj_in_anger/ReverseComplement.htm
>
>
>
Thanks for you replies Mark.
Yes, I've read about the reverseComplement. It may be I'm dense here,
but I can't see how it can help me go from RNA to
See also DNATools.transcribeToRNA(), especially read the javadocs and
contrast that with DNATools.toRNA().
Jacob Rohde <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
08/13/2005 09:17 PM
To: biojava-l@biojava.org
cc: (bcc: Mark Schreiber/GP/Novartis)
Subject:
Take a look at http://www.biojava.org/docs/bj_in_anger/ReverseComplement.htm
Jacob Rohde <[EMAIL PROTECTED]>
Sent by: [EMAIL PROTECTED]
08/13/2005 09:17 PM
To: biojava-l@biojava.org
cc: (bcc: Mark Schreiber/GP/Novartis)
Subject:[Biojava-l] Reverse tra
