Re: [Biojava-l] Schema and Docs for BioSQL

2002-02-20 Thread Thomas Down
On Wed, Feb 20, 2002 at 06:27:13PM -0500, Brian Gilman wrote: > No I meant the DDL conversion...Where can I get that script?? It sounds > like something I could absolutely use!! cvs.open-bio.org:/home/repository/biosql Checkout the biosql-schemas module. Thomas. _

Re: [Biojava-l] Schema and Docs for BioSQL

2002-02-20 Thread Brian Gilman
No I meant the DDL conversion...Where can I get that script?? It sounds like something I could absolutely use!! -B --- Brian Gilman <[EMAIL PROTECTED]> Sr. Software Engineer MIT/Whitehead Inst. Center for Genome Research One Kendall Square, Bld

Re: [Biojava-l] Schema and Docs for BioSQL

2002-02-20 Thread Thomas Down
On Wed, Feb 20, 2002 at 06:16:12PM -0500, Brian Gilman wrote: > Hello Thomas, > > What did you use to generate the postgres ddl?? I haven't found > anything that works very well... The auto-generated version was produced by a Perl script written by Chris. It uses some standard parser modu

Re: [Biojava-l] Schema and Docs for BioSQL

2002-02-20 Thread Brian Gilman
Hello Thomas, What did you use to generate the postgres ddl?? I haven't found anything that works very well... Thanks! -b --- Brian Gilman <[EMAIL PROTECTED]> Sr. Software Engineer MIT/Whitehea

Re: [Biojava-l] Schema and Docs for BioSQL

2002-02-20 Thread Thomas Down
On Wed, Feb 20, 2002 at 01:52:10PM -0500, Marc Colosimo wrote: > Hi, > > Is there any information about using the BioSQL classes in BioJava, such > as the schema for the database or examples in using it? I am interest in > using postgre and biojava to store lots of sequence data. BioSQL is based