Re: [Biojava-l] gromacs shell script

On 8 Dec 2005, at 14:16, Tamas Horvath wrote: I know this is not strictly BioJava, but here's my problem: I create a shell script file that would run a GROMACS MD simulationI generate the necessary input and config files I can make the generated shell script runnable I cannot actually run th

Re: [Biojava-l] gromacs shell script

On 12/8/05, Tamas Horvath <[EMAIL PROTECTED]> wrote:>> Runtime rtime = Runtime.getRuntime();> Process child = rtime.exec("/bin/sh");>>> BufferedWriter outCommand = new BufferedWriter(new> OutputStreamWriter( child.getOutputStream()));>>> outComman

Re: [Biojava-l] gromacs shell script

I tried the ProcessTools method and nothing happens there either... On 12/8/05, Thomas Down <[EMAIL PROTECTED]> wrote:>>> On 8 Dec 2005, at 14:16, Tamas Horvath wrote:>> > I know this is not strictly BioJava, but here's my problem:> > I create a shell script file that would run a GROMACS MD> > s