Re: [Biojava-l] Alternative conformation skipped

2025-05-07 Thread Jose Duarte
There's a call to get alt locs, e.g. something like this: if (g.hasAltLoc()) { System.out.println("## alt locs"); System.out.println(g.getAltLocs().size()); for (Group altLoc: g.getAltLocs()) { for (Atom a : altLoc.getAtoms()) { System.out.println(a); } } }

[Biojava-l] Alternative conformation skipped

2025-05-07 Thread Enrico Morelli
Dear all, we are trying to read the HETATM of the following cif https://files.rcsb.org/view/4KL8.cif with this code: for (Chain c : structure.getChains()) { for (Group g : c.getAtomGroups(GroupType.HETATM)) { for (Atom a : g.getAtoms()) { System.ou