Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Daniel Leidert
Rajarshi Guha wrote: Hi, while working on a presentation, I was wondering: are there any open standards in cheminformatics? Standard may be too strong a term - an alternative might be to ask if there are any open specifications in cheminformatics? Well, that depens on the definition of

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Egon Willighagen
On Thu, Apr 2, 2009 at 10:09 AM, Daniel Leidert daniel.leidert.s...@gmx.net wrote: Rajarshi Guha wrote: Hi, while working on a presentation, I was wondering: are there any open standards in cheminformatics? Standard may be too strong a term - an alternative might be to ask if there are any

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Antony Williams
...@gmx.net] Sent: Thursday, April 02, 2009 4:10 AM To: Rajarshi Guha; blueobelisk-discuss@lists.sourceforge.net Subject: Re: [Blueobelisk-discuss] Open Standards in cheminformatics Rajarshi Guha wrote: Hi, while working on a presentation, I was wondering: are there any open standards

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Jean-Claude Bradley
Rajarshi, I second Christoph - JCAMP-DX is an open standard that could do a lot more good in the chemistry community if the word gets spread more about its utility On Wed, Apr 1, 2009 at 5:28 PM, Christoph Steinbeck steinb...@ebi.ac.ukwrote: Right - and the InChI of course. C. Rajarshi Guha

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Egon Willighagen
On Thu, Apr 2, 2009 at 1:35 PM, Jean-Claude Bradley jeanclaude.brad...@gmail.com wrote: I second Christoph - JCAMP-DX is an open standard that could do a lot more good in the chemistry community if the word gets spread more about its utility Let's summarize this in the BlueObelisk wiki, and

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Egon Willighagen
On Thu, Apr 2, 2009 at 4:05 PM, Craig James craig_ja...@emolecules.com wrote: Egon Willighagen wrote: Let's summarize this in the BlueObelisk wiki, and annotate things with homepage, mailing list, etc. It's always good to define our terms. Open definition:  - Public participation in

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-02 Thread Rajarshi Guha
On Apr 2, 2009, at 10:16 AM, Antony Williams wrote: So, what was it that Rajarshi wanted based on this list? :-) ah...he'll figure it out! :) Actually, I had a mental block that night (I was trying to make some slides on Open Standards in cheminformatics) and was hoping for some

[Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread Rajarshi Guha
Hi, while working on a presentation, I was wondering: are there any open standards in cheminformatics? Standard may be too strong a term - an alternative might be to ask if there are any open specifications in cheminformatics? A number of examples come to mind SDF spec SLN spec OpenSMILES

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread Christoph Steinbeck
CML and JCAMP? C. Rajarshi Guha wrote: Hi, while working on a presentation, I was wondering: are there any open standards in cheminformatics? Standard may be too strong a term - an alternative might be to ask if there are any open specifications in cheminformatics? A number of

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread Rajarshi Guha
On Apr 1, 2009, at 5:22 PM, Christoph Steinbeck wrote: CML and JCAMP? Aah, of course! --- Rajarshi Guha rg...@indiana.edu GPG Fingerprint: D070 5427 CC5B 7938 929C DD13 66A1 922C 51E7 9E84

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread Christoph Steinbeck
Right - and the InChI of course. C. Rajarshi Guha wrote: On Apr 1, 2009, at 5:22 PM, Christoph Steinbeck wrote: CML and JCAMP? Aah, of course! --- Rajarshi Guha rg...@indiana.edu GPG Fingerprint: D070 5427 CC5B 7938

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread richard apodaca
/03/19/a-comprehensive-guide-flexmol-a-modern-language-for-chemical-representation-part-1-outlining-the-problem Best, Rich --- On Wed, 4/1/09, Christoph Steinbeck steinb...@ebi.ac.uk wrote: From: Christoph Steinbeck steinb...@ebi.ac.uk Subject: Re: [Blueobelisk-discuss] Open Standards

Re: [Blueobelisk-discuss] Open Standards in cheminformatics

2009-04-01 Thread Antony Williams
: BlueObelisk-Discuss Subject: Re: [Blueobelisk-discuss] Open Standards in cheminformatics CML and JCAMP? C. Rajarshi Guha wrote: Hi, while working on a presentation, I was wondering: are there any open standards in cheminformatics? Standard may be too strong a term - an alternative might