Re: [caret-users] Spherical registration

2006-11-29 Thread Mateus Joffily
Hi Donna, I don't know what happened, but now all the links work. Thanks, Mateus Donna Dierker wrote: Mateus, Yes -- that's the right archive. I don't understand why you're getting the time out errors; I can't replicate the problem on my end. What happens when you try this link (i.e.,

Re: [caret-users] Spherical registration

2006-11-29 Thread Donna Dierker
I did remove the port numbers from the list, which seemed to have no ill effect on my end. Perhaps it resolved the problem on your end. On 11/29/2006 03:15 AM, Mateus Joffily wrote: Hi Donna, I don't know what happened, but now all the links work. Thanks, Mateus Donna Dierker wrote:

[caret-users] border color file

2006-11-29 Thread Mateus Joffily
Hi Donna, When I try to load the border files, after the surface alignement, I get the warning message: 'You have selected border files that require a border color file but no border color file is selected'. In Erin's document, it is said to: File : Open Data File : File Type = Border Color

Re: [caret-users] border color file

2006-11-29 Thread Erin Reid
Hi Mateus, You can find the border color file in the PALS_B12.LR directory. Erin Mateus Joffily wrote: Hi Donna, When I try to load the border files, after the surface alignement, I get the warning message: 'You have selected border files that require a border color file but no border color

[caret-users] crash of X KDE session

2006-11-29 Thread marco tettamanti
Hi Donna and Hohn, I am experiencing a severe problem with my caret installation in linux: whenever I try to import an Analyze Volume file, my entire X session immediately crashes, including all applications and I have to login in KDE from scratch. I couldn't tell whether the problem is

Re: [caret-users] crash of X KDE session

2006-11-29 Thread John Harwell
Marco, Another user had a problem similar to this. I believe it has to do with the FreeType library which gets used to create text characters that are drawn on the volume slices to show the voxel and its stereotaxic coordinate. See if there is a file in your home directory named

[caret-users] distance from a node

2006-11-29 Thread Mateus Joffily
Hi, In Caret5.5, is there a way of selecting a node and finding all (or some) nodes that are at a given distance from it? I think I am looking for something similar to what is described in section 2.17.2 (Foci Data Searches) of the 'Caret Tutorial – the Basics'. But Section 2.17.2 regards

Re: [caret-users] distance from a node

2006-11-29 Thread Donna Dierker
If you were talking about geodesic distance (i.e., running along the contour of the fiducial surface -- not as the crow flies through the CSF/WM), then you could use the Surface: ROI feature for this purpose. (First operation Geodesic Distance, and then threshold the resulting metric at the

Re: [caret-users] crash of X KDE session

2006-11-29 Thread Donna Dierker
Hi Marco, Although your problem is a bit different, another possible culprit is the .caret5_preferences file: http://brainvis.wustl.edu/pipermail/caret-users/2006-November/000931.html We're still struggling with this problem at University of Washington. Today I asked Veronica to try the