Re: [caret-users] segmentation fails w/ uniformized data

2006-12-07 Thread Donna Dierker
Hi Rebecca, As John said, uploading your volume is the quickest way for us to help, but here are some additional thoughts/factors: * For very non-uniform volumes, 3dUniformize may not be enough. You might need a bigger gun like FSL's FAST (http://www.fmrib.ox.ac.uk/fsl/fast/index.html),

[caret-users] segmentation fails w/ uniformized data

2006-12-06 Thread Rebecca Ebitz
Hi - I'm having a problem segmenting normalized scans. I've got a very non-uniform volume (macaque, from a 4.7T w/ 0.5 mm voxels) and have used AFNI's 3dUniformize to correct these issues. However, when I try to segment the normalized data in CARET, it either gives me an error (usually

Re: [caret-users] segmentation fails w/ uniformized data

2006-12-06 Thread John Harwell
Rebecca, Can you upload your volume to http://pulvinar.wustl.edu/cgi-bin/ upload.cgi and we will see what is going on. Please let us know when you have uploaded your volume and the name of the volume file. -- John Harwell [EMAIL