[caret-users] resizeunderlayvolume

2007-03-09 Thread Florian Gerstl
Dear Caret-Users,
I'm trying to find something equal to the resize underlay volume menu
in  caret_command ..
I'm trying to automatically segment a bunch of occipital lobes and just
masking out the non-occipital areas wouldn't work...

Is there a caret_command spell for resizing the anatomy volume?

thanks, florian

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fn:Florian Gerstl
n:Gerstl;Florian
org:Medical University of Vienna, Austria;Department of Psychiatry and Psychotherapy, Division for Biological Psychiatry
adr:Medical University of Vienna, MUW;;Waehringer Guertel 18-20;;Wien;1090;Austria
email;internet:[EMAIL PROTECTED]
title;quoted-printable:Functional NeuroImaging Unit  =E2=88=92   PET  fMRI
tel;work:+43-1-40400-3773
tel;fax:+43-1-40400-3825
note:skype: doogbert
version:2.1
end:vcard



Re: [caret-users] resizeunderlayvolume

2007-03-09 Thread Donna Dierker

Hi Florian,

To my surprise, no -- I don't think there is.  Seems like a useful 
option, but currently John is working on other things.


You might download AFNI (http://afni.nimh.nih.gov/afni) and try 
3dZeropad.  Even if you don't use AFNI for analysis, it has some really 
handy command line utilities.


Donna

On 03/09/2007 04:20 AM, Florian Gerstl wrote:

Dear Caret-Users,
I'm trying to find something equal to the resize underlay volume menu
in  caret_command ..
I'm trying to automatically segment a bunch of occipital lobes and just
masking out the non-occipital areas wouldn't work...

Is there a caret_command spell for resizing the anatomy volume?

thanks, florian
  




Re: [caret-users] resizeunderlayvolume

2007-03-09 Thread Florian Gerstl
Hi Donna,

Indeed,  3dZeropad did the trick.. And thank's to broadband-internet
downloading over 200 Mb of AFNI- code definitely solved the problem
faster than if I had started coding something on my own ;-)


thank's for your quick help
best regards,

Florian


 Hi Florian,

 To my surprise, no -- I don't think there is.  Seems like a useful
 option, but currently John is working on other things.

 You might download AFNI (http://afni.nimh.nih.gov/afni) and try
 3dZeropad.  Even if you don't use AFNI for analysis, it has some
 really handy command line utilities.

 Donna

 On 03/09/2007 04:20 AM, Florian Gerstl wrote:
 Dear Caret-Users,
 I'm trying to find something equal to the resize underlay volume menu
 in  caret_command ..
 I'm trying to automatically segment a bunch of occipital lobes and just
 masking out the non-occipital areas wouldn't work...

 Is there a caret_command spell for resizing the anatomy volume?

 thanks, florian
   

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 caret-users@brainvis.wustl.edu
 http://pulvinar.wustl.edu/mailman/listinfo/caret-users



begin:vcard
fn:Florian Gerstl
n:Gerstl;Florian
org:Medical University of Vienna, Austria;Department of Psychiatry and Psychotherapy, Division for Biological Psychiatry
adr:Medical University of Vienna, MUW;;Waehringer Guertel 18-20;;Wien;1090;Austria
email;internet:[EMAIL PROTECTED]
title;quoted-printable:Functional NeuroImaging Unit  =E2=88=92   PET  fMRI
tel;work:+43-1-40400-3773
tel;fax:+43-1-40400-3825
note:skype: doogbert
version:2.1
end:vcard