Re: [caret-users] Generating cortical hull surface

2016-01-14 Thread Rosita Shishegar
> http://brainmap.wustl.edu/pub/donna/IN/JOHN/align.html > login pub > password download > > > Donna > > > On Jan 13, 2016, at 10:09 PM, Rosita Shishegar < > r.shishe...@student.unimelb.edu.au> wrote: > > > Hi Donna, > > > > Thanks for th

Re: [caret-users] Generating cortical hull surface

2016-01-13 Thread Rosita Shishegar
k > for your sheep. > > Again, not sure what the end game is here (e.g., do you want sulcal depth? > hull? registration?). I fear there will be other showstopper steps down > the road that are more sheep-proof. ;-) > > (Sorry, Tim, I'm having trouble thinking of bd puns here

Re: [caret-users] Generating cortical hull surface

2016-01-10 Thread Rosita Shishegar
na Dierker <do...@brainvis.wustl.edu> > > wrote: > > > >> Upload a zip file containing the script (or just email commands used) > >> and > >> the inputs (surface or segmentation) here: > >> > >> http://brainvis.wustl.edu/cgi-bin/upload.cgi

Re: [caret-users] Generating cortical hull surface

2016-01-06 Thread Rosita Shishegar
; the inputs (surface or segmentation) here: > > http://brainvis.wustl.edu/cgi-bin/upload.cgi > > I'll have a look. > > > On Jan 5, 2016, at 12:31 AM, Rosita Shishegar < > r.shishe...@student.unimelb.edu.au> wrote: > > > Hi Donna and all caret users, > > &g

Re: [caret-users] Generating cortical hull surface

2016-01-04 Thread Rosita Shishegar
p.wustl.edu/pub/donna/US/UCDAVIS/cwn.zip > login pub > password download > > You'll need to adapt it to your data, but it will give you a head start. > > Donna > > > On Sep 2, 2015, at 7:01 PM, Rosita Shishegar < > r.shishe...@student.unimelb.edu.au> wrote: >

[caret-users] Generating cortical hull surface

2015-09-02 Thread Rosita Shishegar
Hi, I am a new Caret user and I am working on animal brain data, which are manually segmented and triangulated mesh of cortical surface is already extracted and pre-processed. I want to measure Sulcal Depth of theses brains and so I need to generate Cerebral Hull surface of them. Is there