If you have individual func.gii files, then it makes sense to view them on your
individual's midthickness surface. If you have group data, you might use an
atlas dataset as your viewing substrate. It doesn't look like there are any
32k versions of Conte69 available for caret5 format:
http://sumsdb.wustl.edu/sums/directory.do?id=8293668dir_name=Conte69_caret5
But there is a 32k version for workbench format:
http://sumsdb.wustl.edu/sums/directory.do?id=8293673dir_name=32k_mesh_workbench
You can view the surf.gii files in the workbench directory using caret5, but
not all the features in caret_command will work with them.
You might also find 32k group average midthickness, inflated, etc. in various
Human Connectome Project (HCP) datasets, e.g., the datasets listed under
Connectome Workbench Data here:
https://db.humanconnectome.org/data/projects/HCP_500
But these are also in workbench -- not caret5 formats.
On Oct 1, 2014, at 2:11 PM, Timothy Coalson tsc...@mst.edu wrote:
The script quoted in the post you linked specifically resamples the surface,
so if that is what you did, the output from it is the midthickness in
fs_LR32k. Other surface types can be resampled the same way. Caret5 will
load .surf.gii files just fine, you don't need to convert back to topo/coord
(but you can, with caret_command -file-convert -sc ...).
Tim
On Wed, Oct 1, 2014 at 11:22 AM, Alexander Schäfer aschae...@cbs.mpg.de
wrote:
Dear List,
A previous post
(http://brainvis.wustl.edu/pipermail/caret-users/2014-August/006194.html)
on this list helped me to successfully downsample my fs_LR164k
(func.gii) data to fs_LR32k. Now, I have the problem that I only have
the provided 32k sphere file to overlay the data onto. Is there some
average fs_LR32k mesh (.coord, .topo for inflated, midthickness, etc)
that could be shared by someone?
Thank you,
Alex Schaefer
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