Re: [caret-users] PALS atlas labels to Freesurfer fsaverage

2009-10-19 Thread Donna Dierker
Hi Gyorgy, I think this should be doable, because David and I did some work a while back to generate an improved PALS - fsaverage deformation for some orbitofrontal regions Brad Dickerson wanted. David did the final registration borders, and they're probably in sumsdb somewhere, but I'll

Re: [caret-users] PALS atlas labels to Freesurfer fsaverage

2009-10-19 Thread David Van Essen
Gyogy (and others interested in mapping data between fsaverage and PALS-B12 in either direction): SumsDB contains relevant data in the following directory: http://sumsdb.wustl.edu/sums/directory.do?id=6612992dir_name=REG_PALS_with_FREESURFER The subdirectory

Re: [caret-users] PALS atlas labels to Freesurfer fsaverage

2009-10-19 Thread Donna Dierker
Here is one of the messages David sent to Brad on 5/27/2009: Hi Brad, Well, it has taken another month-plus, but we have now gotten a mapping between PALS and fsaverage for both left and right hemispheres that I am quite happy with. I made an extended dataset publicly accessible in

Re: [caret-users] PALS atlas labels to Freesurfer fsaverage

2009-10-19 Thread Homola
...@brainvis.wustl.edu] Gesendet: Montag, 19. Oktober 2009 17:55 An: Caret, SureFit, and SuMS software users Betreff: Re: [caret-users] PALS atlas labels to Freesurfer fsaverage Gyogy (and others interested in mapping data between fsaverage and PALS-B12 in either direction): SumsDB contains relevant

[caret-users] PALS atlas labels to Freesurfer fsaverage

2009-10-18 Thread Homola
Hi caret-users! Is there a feasible and easy way to transform the human visuotopic PALS atlas labels to Freesurfer labels that can be applied to fsaverage? What I can do now is to save the labels in Freesurfer format and load them into tksurfer with the corresponding PALS surface. But I have