Re: [caret-users] A precuneus cluster disappeared after surface projection

2012-09-16 Thread David Van Essen
Hello Dale, If Donna's explanation is correct (as I suspect is the case), you may have better results using the Conte69 atlas surface that is registered to the FNIRT MNI152 volume, In general, we are encouraging investigators to migrate to this atlas for a number of reasons, including the

Re: [caret-users] caret-users Digest, Vol 108, Issue 3

2012-09-16 Thread Andrew Bock
Hi Donna, Thanks for your advice to redirect the std output and error to a log file, upon inspecting the output I found that my script was actually calling: caret_command $'-surface-apply-transformation-matrix\302\240lh.white.coord.gii\302\240lh.white.topo.gii' lh.white.coord.gii -matrix 1 0 0

Re: [caret-users] caret-users Digest, Vol 108, Issue 3

2012-09-16 Thread Donna Dierker
Ah, the non-printing character menace strikes again. Glad you apprehended him/her. On Sep 16, 2012, at 2:55 PM, Andrew Bock ab...@u.washington.edu wrote: Hi Donna, Thanks for your advice to redirect the std output and error to a log file, upon inspecting the output I found that my