Re: [caret-users] strange patches on grey surface?

2017-09-01 Thread Harwell, John
On Sep 1, 2017, at 9:09 AM, Harwell, John mailto:john.harw...@email.wustl.edu>> wrote: It appears that my response on Tuesday did not go through, perhaps due to a change in my email address. John Begin forwarded message: From: "Harwell, John" mailto:john.harw...@email.wus

Re: [caret-users] info in the deformation maps

2017-10-20 Thread Harwell, John
Hello, You are correct, it is not an affine matrix. A description of the file’s content is available at http://brainvis.wustl.edu/CaretHelpAccount/caret5_help/file_formats/file_formats.html#deformationMapFile. Essentially, the deformation map file defines a resampling of one surface triangul

Re: [caret-users] info in the deformation maps

2017-10-23 Thread Harwell, John
following: ADAP_BARY_AREA BARYCENTRIC as explained in the command-line usage instructions On Oct 20, 2017, at 2:36 PM, Harwell, John mailto:jharw...@wustl.edu>> wrote: Hello, You are correct, it is not an affine matrix. A description of the file’s content is available at http

Re: [caret-users] Using the Caret command metric smoothing for a cortical measure saved as a text

2017-12-04 Thread Harwell, John
Files ending in MGZ appear to be FreeSurfer volume files (see https://surfer.nmr.mgh.harvard.edu/fswiki/FileFormats) and caret_command is unable to read that file format.. Try converting your files to an FreeSurfer’s ASCII format using the FreeSurfer program mris_convert. While we try to supp